Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1202 |
Symbol | |
ID | 4623753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1498112 |
End bp | 1500916 |
Gene Length | 2805 bp |
Protein Length | 934 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639796417 |
Product | fused sensor protein/response regulator |
Protein accession | YP_942633 |
Protein GI | 119944953 |
COG category | [S] Function unknown [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain [COG2202] FOG: PAS/PAC domain [COG3287] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.127641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.087847 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTAA TAAACTGCCA GTTTAGAACA AAAAATGATT TAGAACTTTT TATAGATCAA AATATTAACG ATGCTAATAT TTCTATTTTA ATTCAAGTTT TTAGTGGTGA TTTGAATATT GCTCATGTTC AGCAAGTGTT AGATACTTTA AAGTTCAAAC TTCCACATGC AACGATCATT GGTTGCTCAA CGGCTGGCGA GATAGCTTCT GGCGCCATGA AAAAGAATAC TATTCAAATT TCTTTCTCTC TTTTTGAAAA AACCAATCTT CAACTCTTTT ATTACCCTCA AACAAATTTT ACAACGGGTG AGAAAGCTTC ATGTGATGTT ATTTCCCAAA ATACAAAAGC CGTTATTGCT TTTAATGAGG CCTTTAAAGG GGATGCTGAA CTTTTTTTCG AAGGGTTTTC ATCTAAAAAA CAAAATGCCC CCATCTCCGG CGGAAACGCT GGCGATAATC TTTTATATGG GAAAACTTTT GTTATCTATG ACGATAAAAT TTATTTTGAG GGCATCGTCC TTTGTGCGTT GAATAGCGAT AGCTTACATG CACACACAAA TCATTCCTTC AGCAGTGCTT CTATCGGCAC AGAAATGATT GTTACTAAGG CTGTGGATAA TGTGATCTAT GAAATAGATT ACACGCCTGT CGATAAAATT TATAGATATT ATCTGGGGGA TAATATTCTA CAACATTTTC CAATGAGTGT TGTTGAATTT CCATTGGTAA AAATAGAGGG AGAAATGACT GTTGCCAGAT CAGCCGCTAG AATAAATGAA GACGGTGGAT TTTTATATAT AGGTCATTTT GAAAATGGCG ATAAAGTGAA ATTTGCAATA ACAAACAGTG TAGAGACATT CTCAAAATCA GATGATTTAT ATACAAAAAT AATGTCTAAT CCCGTTGAAG CTACCTATGT TTATTCCTGT GCAGGCAGAA AAAGATTCCC AACAAAATGT CTGAATTATG AACTTGGGCT GATTGAAAAA GTCGCCCCTT CGAGTGGTTT TTTCAGCTAT GGAGAGTTTT TTTATTCAAA AACAAAAAAT CACCTTTTAA CGCTCACTAC AACGACGCTG AGTTTGTCTG AAACAGACAT TATTCAAAGC CCAGATGAAA TTCCAAAAAG GATAAACGGC CATTCTATAT TAAACCCACT GATACACTTA GTTAATGTCT CAGATACGAA CTTAAATCAG TATAAACAAC TTTTAGATAA GAGTTCTATT GTCTCAAAAG CAGACATTCA AGGTGTTATC ATTTATGTTA ATGATAATTT TTGTAAAATT TCAGGCTACT CTCGAGAAGA ATTGATTGGA AAAAACCACA GTATAGTAAG GCATCCGGAT AACAGTAATA GCATATTTAA AAATATGTGG ACGACTATCA CTGCTAAAAA AGTCTGGAAA GGCACGCTAA AAAACCGTGC AAAAGACGGC TCCACCTACT ATGTAAAGAC CTTAATAATG CCTATTCTAG ATGACCAGGG ACATATTGTA AGTTATATAG CGGCAAGAAC CGATGTGACA GAACTAATAA AAAAAGACGA AATTATTAAA CAACAAAATG AAGATAAGCT AACCGGTTTA AAAAATAGAA GTGCACTGAT AGACAAACTG AAAGACATTA AGAGAGAAGA TGCGACGCTT ATTCTTATGA ATATAGATAG ATTTTCTGAT ATTAATGATT ATTACGGTTA TGAGAAAGGT GATAAAACCT TGGAACATTT TGCCTCTGTT CTTAAAGGTA AATATGTTGA ATTTTCCAGA ATAAGCAGTG ACGTCTCTAG CGTCAGTTGT GATATTTTTA GAATAAGTGG TGATGAGTTT GCAATACTTT GCGAGCACTC ATTAGATAAA AAAATAAAAG AGATGATAGC AGGGTTGATT ATGAGCCTGG AGAATGAAGT ATATGAAATA TTAGATGATA AAATCACCTT GCTTTTATCG TGTGGAGTGG CTAATGGTGC TAAAAATGAA ATATATAATC TTGCCCATAT TGCTTTAAAA GAAAATAAAA AAGATAATAA TACAGTTACT TTTTTTAATG ATAATATGAA TTTATACAAC AAAATAGCAG AAAATATAAA AGTGATAGCA AGCATAAAAG AGGGAATACT TAACGATAAA TTTGTGCCCT TTTATCAAGG TATAGTTAAT AATAAAACCA AAAAAATAAC TAAATATGAG TGTCTGATAC GCTTAAAAGA AGAAAATGGT AAGGTGCTGA CGCCGTATTT TTTTCTGGAA CATGCTAAAA AAGCGAAGCT TTATTATAAA CTTACGATGA TTATGATCAG GAAATCATTT GAAAAGTTTG CAGGCAATAA CTCTGATTTT TCTATCAACT TTACACTTCA AGATATTCAA TCCGAGACCG TTGTAAGCAT GTTGATGGAT TATCTTGAGC GGTATCAATG TGGAAACAGA TTAATTATAG AAATAGTCGA GTCTGAAGGA ATTGAAAATT TTAATGAACT GTCAGATTTC ATAAAACAGA TTAAAAAATA CGGTTGTAAA GTGGCAATAG ATGATTTCGG ATCAGGCTAT TCTAACTTTC ATTATTTATC AAAATTAGAT GTGGACTATA TAAAAATAGA TGGCTCTTTA ATAAAAAATA TAGATAATGA CCCCTCTCAA CTTGCAACCG TTGAGAGTAT TTTACTTTTT GCTAAAAAGA TGAATATAAA AACGATTGCT GAATTTGTTG AGACAAAAAA CATTTATGAT ATTTTAAATG ATTTAGGCGT TGATTTTTCC CAAGGATACT ATTTTTCTAA ACCACAGGAA GAAATAGAAA AATAA
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Protein sequence | MKLINCQFRT KNDLELFIDQ NINDANISIL IQVFSGDLNI AHVQQVLDTL KFKLPHATII GCSTAGEIAS GAMKKNTIQI SFSLFEKTNL QLFYYPQTNF TTGEKASCDV ISQNTKAVIA FNEAFKGDAE LFFEGFSSKK QNAPISGGNA GDNLLYGKTF VIYDDKIYFE GIVLCALNSD SLHAHTNHSF SSASIGTEMI VTKAVDNVIY EIDYTPVDKI YRYYLGDNIL QHFPMSVVEF PLVKIEGEMT VARSAARINE DGGFLYIGHF ENGDKVKFAI TNSVETFSKS DDLYTKIMSN PVEATYVYSC AGRKRFPTKC LNYELGLIEK VAPSSGFFSY GEFFYSKTKN HLLTLTTTTL SLSETDIIQS PDEIPKRING HSILNPLIHL VNVSDTNLNQ YKQLLDKSSI VSKADIQGVI IYVNDNFCKI SGYSREELIG KNHSIVRHPD NSNSIFKNMW TTITAKKVWK GTLKNRAKDG STYYVKTLIM PILDDQGHIV SYIAARTDVT ELIKKDEIIK QQNEDKLTGL KNRSALIDKL KDIKREDATL ILMNIDRFSD INDYYGYEKG DKTLEHFASV LKGKYVEFSR ISSDVSSVSC DIFRISGDEF AILCEHSLDK KIKEMIAGLI MSLENEVYEI LDDKITLLLS CGVANGAKNE IYNLAHIALK ENKKDNNTVT FFNDNMNLYN KIAENIKVIA SIKEGILNDK FVPFYQGIVN NKTKKITKYE CLIRLKEENG KVLTPYFFLE HAKKAKLYYK LTMIMIRKSF EKFAGNNSDF SINFTLQDIQ SETVVSMLMD YLERYQCGNR LIIEIVESEG IENFNELSDF IKQIKKYGCK VAIDDFGSGY SNFHYLSKLD VDYIKIDGSL IKNIDNDPSQ LATVESILLF AKKMNIKTIA EFVETKNIYD ILNDLGVDFS QGYYFSKPQE EIEK
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