Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1200 |
Symbol | |
ID | 4623602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1495519 |
End bp | 1497378 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639796416 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_942632 |
Protein GI | 119944952 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.645678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACAAA ATAAAAAATC AGCAGTAAGG AAGGTTGATG ACTCAAGTCA AATCTATCGG ATGCCAGATG GATTACTACC AGATCCTATC GCTGATTTCA TCAAGTTGTC TGCTGCCGAA GGTGATCTCC TGTTCTGGCA ATGGGAACCA AATTTAGGGC GCGTCGACTT CTATACGCCA GAAAAAGCGG CGGAAAAACA AAATTTACGG CGTCTTGGCG AAAATATATC AAACTTGATC GCTTCTAGGG TTGATAGTTT TACACTTCGC AGTGAAAAAT ATGAGATTAA AATTTGTGAC CCTCAGGGCA ATGCGACATG GAAAAAGATT TCCCTGCGAT TTTTCTTGGG AGCGGATGGG GAAATTGAAC GGGTGGTTGG TACTGCGCAG GACATCACAG ATTTGATAGC AATGCAATTG GGGCTTGAAA ACCAACTCGA TTTTATTAAT ACCCTTCTGG ATAGCTTGAG CAGTCCGGTA TTTTTCAAGG ATGCTGAACT GGTGTATCGC CATTGCAACA AAGCCTTTGA AGAATATTTG GGCAAGCCAA AGAAGGATAT CCTTGCAAAG ACGGTATTTG ATTTGTGTCC CCCGCATTTG GCGGAAATTT ATCACCGAGC AGATCGGGAT CTTCTTGAGC AGCGCTTACC ACAAGTGTAT CAAACAAAAG TACATTCAGC CGATGGGATG GAGCACAATG TGATTTTCAA CAAATCGATG GTGTTCAACA AAAAGGGCGA GATAACTGGA ATGATTGGTA TCATCAATGA CATTGATGAT CGCGTCCAGA TGGAAAATAG ACTGCAAAGG ATAATGGACA TTAAAGACGC GATCATGGAG ATAAACCGTG CAATCACTGA TGCGAACACA TCGGAACAGT TTTATGCGAT TGTCCTTGAC TGTATTCTTT CGGCCATGCA ATCGGCTGAA ACCTGCGGTT TCCTGATGCT TGATTCTGTA GGCAACTTAA AAATGGTGGC TGCCAGTGGA TTATACAACG CATGGAAAAA ACCAGTGCAG GTGGAATTGG AAAAATCCAT GGCCTGGAAT GCGATGGCAG AAAATAAAAA AAGCTGTTTT TATATCGATG ATATCCACAA ATTTTCCAGG CAAAAAAGCA TTGAATCGCA TGCTTTATTG CAGCAACTGA AAATACGTTC CCTGCTCGGT GCTCCTATTC TTAACGAAGG AAAATTGATC GGATTCATTA CTGTCGGCAG CCGCAATATT GACGCCTATG ACGAAACTGA CCTGTTTATT ATGGAGTATG TGCGCAGTCA AATAATCCAG GTTCTTAATC GACAATTTTT ATATGATAAG AATGTTACTC TGGCGCGATA TGATAGTTTG ACGGGGTTGC TCAACCGCAG ATATTTTGAA GAATTATTTG AAAGACATCA GAATCGCGCA AAGCGTTATG ATGAAAAATT TCATTTGGTC GTAATAGACC TTGATAATTT TAAAGAGATT AATGACCAAT GTGGCCATCT TTGTGGGGAT GCGGTACTTG TAGATTTCGC CAAAAAATTG ACCGCCTTAT TTCGTGAATC TGATATTATT TGCCGCTTTG GCGGTGATGA ATTCCTCCTT GTATTAATAG ATATAAATAT CAGCAAACTG GTGCAGAAGA TTGAATTAAT AAAAACAAAA CTTCAAACTA TCCCCTTTAT TTACAATGAA AACAGTCTGC CTTATAGTTT CAGTTATGGA ATAGCGGAAT GGCCTGCGGA CGGTGCCAAT CTGGATCTCC TGACTTGCCG TGCGGATAAT GAGATGTACA AGAACAAGCG CGCGTCAAAA AAACAGCCGA ATAAGATGCA CCACGCCAGT CAAAAAACAG AATCTGCGGC ATTTATTTGA
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Protein sequence | MVQNKKSAVR KVDDSSQIYR MPDGLLPDPI ADFIKLSAAE GDLLFWQWEP NLGRVDFYTP EKAAEKQNLR RLGENISNLI ASRVDSFTLR SEKYEIKICD PQGNATWKKI SLRFFLGADG EIERVVGTAQ DITDLIAMQL GLENQLDFIN TLLDSLSSPV FFKDAELVYR HCNKAFEEYL GKPKKDILAK TVFDLCPPHL AEIYHRADRD LLEQRLPQVY QTKVHSADGM EHNVIFNKSM VFNKKGEITG MIGIINDIDD RVQMENRLQR IMDIKDAIME INRAITDANT SEQFYAIVLD CILSAMQSAE TCGFLMLDSV GNLKMVAASG LYNAWKKPVQ VELEKSMAWN AMAENKKSCF YIDDIHKFSR QKSIESHALL QQLKIRSLLG APILNEGKLI GFITVGSRNI DAYDETDLFI MEYVRSQIIQ VLNRQFLYDK NVTLARYDSL TGLLNRRYFE ELFERHQNRA KRYDEKFHLV VIDLDNFKEI NDQCGHLCGD AVLVDFAKKL TALFRESDII CRFGGDEFLL VLIDINISKL VQKIELIKTK LQTIPFIYNE NSLPYSFSYG IAEWPADGAN LDLLTCRADN EMYKNKRASK KQPNKMHHAS QKTESAAFI
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