Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1183 |
Symbol | |
ID | 4624482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1474653 |
End bp | 1475483 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639796396 |
Product | integrase catalytic subunit |
Protein accession | YP_942617 |
Protein GI | 119944937 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0773839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGTTA TCTGCCCCTT AATTGGTGTC GAAATTCGCA ATTATTACAG TTACTTAAAA CGTCGTGAAA CAAAAAAGTT CGATCCAGAT CATGGCGACA TGATTGAAAT GATACAAAAA ATATCAGAGA GCAGCGATCA CACCTATGGC AGCCGTCGAA TGCAGAAAAG CTTAAATGCA TTGAGCTTCC CAGTTGGACG CTGGAAAACA GCACAATTAA TGAAAGAAGC AGGCGTTTGG GTTCGTTATA AAAAGAAATA TAAAGTGACG ACAAACAGTG AGCATAAGAA ACCTGTTTAT AAAAATGTAC TTAAGCAAAA CTTCAAATAC GATCAGCCAA ATAAAGCTTA TGTTGGCGAT ATAACCTATA TTTGGACAAC CGAGGGCTGG TTATATCTTG CTGTTATCAT TGACTTATAT TCGAGAAAAG TGGTTGGCTG GAGCATGTCA TCACGAATGA AGGCAAGTCT TGTATGTGAT GCATTAACCA GGGCTATTTG GCAACGAAAC CCACCTCCAG GGCTTATTGT TCATTCAGAT CAAGGTGTTC AATATGCAAG TGACCAATAT CGTAAATTGC TTAAGAGTCA TAATTTTATT GGGAGCATGA GCAAAAAAGG TTGTTGTTGG GATAATGCTG TCGCTGAAAG CTTTTTTGGC AGTCTAAAGC AGGAAAGAGT GCATTGGAAT AATTACGCTA CTCGCTATGA AGCACAACAA GATATATTGC ATTACATAAC CATGTGGTAC AACAGCAATC GTCTTCATTC ATACTTAGGT TATTGTTGCC CAAGCACTTT TGAAATGATG AACGGGTATT TGAAAAAGTA G
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Protein sequence | MRVICPLIGV EIRNYYSYLK RRETKKFDPD HGDMIEMIQK ISESSDHTYG SRRMQKSLNA LSFPVGRWKT AQLMKEAGVW VRYKKKYKVT TNSEHKKPVY KNVLKQNFKY DQPNKAYVGD ITYIWTTEGW LYLAVIIDLY SRKVVGWSMS SRMKASLVCD ALTRAIWQRN PPPGLIVHSD QGVQYASDQY RKLLKSHNFI GSMSKKGCCW DNAVAESFFG SLKQERVHWN NYATRYEAQQ DILHYITMWY NSNRLHSYLG YCCPSTFEMM NGYLKK
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