Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1164 |
Symbol | |
ID | 4624553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1452883 |
End bp | 1453890 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639796378 |
Product | integrase catalytic subunit |
Protein accession | YP_942599 |
Protein GI | 119944919 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.504403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.136227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAATCG CTTTTTCTCC GGCAAGAGAT GCAACAATGA AAACATATAA CCAACTGACC TACGAACAAC GATGCCAGAT TTATGCCTTA AAGAAAACAG GTTTGAGTCA AAATAAAATA GCAAAGCAAC TAAGTGTTAG CCACTCAACG ATTAGCAGGG AGTTGTCCCG TAATACAGGT AAGCGTGGTT ATCGTATTCA GCAAGCTCAA ATATCATCAG ATAAGCGTCG ATTAGCCGCT TGTAAAGCCA TTAAAATGAC AACAAGTCTC ATTGAGTTAA TTGACTCCAG AATTAAAGAA AAATGGAGTC CAGAGCAGAT ATCAGGCAGG CTTAGAGAGC AACAAAGCAT CAATATTAGC CATGAAACCA TTTATCAGCA TGTTTGGTCA GATAAAAAAA GTGGCGGTAA CTTATTCAAA AAATTACGTA GGAAAGGAAA AATTTACCAA ACACGCAATA AAGATAAGCA AGCAGGTAGA GGGTTTATAA AGAACCGCAT AAGTATTGAT GAGCGCCCAC AAGTTGTTGA TGATAAAAGC AGAATGGGTG ATTGGGAAAT CGACCTGGTT ATTGGCAAAG GACACAGTGG CGCGTTGGTC ACTATTGTAG AGCGGAAAAC TAGCTTTACG GTGTCGACAC GTGTAGATGA CAAATCAGCG AAAACAGTCA CAGCAGCGAC CATTGCTTTG TTAAAACCGT TTGAAGATTC CGTAATAACG ATCACTGCGG ATAATGGTAA AGAATTTGCT TATCATGAAG AAATGACTGA GAGTTTGAAA TGTGATGTGT ATTTTGCAGA TCCTTATTGT TCGTGGCAAC GAGGATTGAA TGAAAACACC AATGGTCTAT TACGACAATA TTGGCCGAAA TCAACAGACT TCAAAAAAGT ATCGCAATCA GAAGTTCAAG ATGTAATAGT CAAACTCAAT GATAGACCAA GAAAAAAAAA AAATTACAAA ACGCCAGCCA AATTAATGGC TGAACATAGA GTGGCTATAG CCGCTTAG
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Protein sequence | MLIAFSPARD ATMKTYNQLT YEQRCQIYAL KKTGLSQNKI AKQLSVSHST ISRELSRNTG KRGYRIQQAQ ISSDKRRLAA CKAIKMTTSL IELIDSRIKE KWSPEQISGR LREQQSINIS HETIYQHVWS DKKSGGNLFK KLRRKGKIYQ TRNKDKQAGR GFIKNRISID ERPQVVDDKS RMGDWEIDLV IGKGHSGALV TIVERKTSFT VSTRVDDKSA KTVTAATIAL LKPFEDSVIT ITADNGKEFA YHEEMTESLK CDVYFADPYC SWQRGLNENT NGLLRQYWPK STDFKKVSQS EVQDVIVKLN DRPRKKKNYK TPAKLMAEHR VAIAA
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