| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1153 |
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| Symbol | lpxC |
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| ID | 4624542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1443071 |
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| End bp | 1443997 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639796368 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_942589 |
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| Protein GI | 119944909 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000456436 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.47842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAAC AAAGAACACT TAAGAAGAGT GTCAAGTCAA TAGGTATTGG CCTGCACTCA
GGTAATAAGG TGAAAATTGA ATTCCACCCT GCACCAGCCA ATAGCGGTAT TGTATACCGC
CGTACCGATC TTGATCCTAT TGTTAGTTTT AAAGCGCATG CACAAGCGGT CCAAGAAACG
CTTTTATGCA CTTGCTTAGT TAACGATCAG GGCCAAAAAA TATCAACGGT AGAACATCTT
TCTGCTGCAC TTGCCGGGTT GGGTATTGAT AATATAATTA TTGATGTTGA CGCCCCTGAA
ATTCCAATTA TGGATGGCAG TGCAAGTCCT TTTATTTTTC TCCTGCAATC GGCAGGTATT
GAAGAGATAA ACAGTCCGAA AAAATTCATT CGTATTAAAA AAATGGTTCG GGTTGAAGAT
GAAAAAGAGG GTAAATGGGC TGAATTACAC CCATCGAATA AAGGCTTTAG TTTAGATTTT
AAAATCGACT TCGATCACCC CGTTTTTGAA GGTCAAAATC AACATATAAA AATGGACTTT
TCCGGTGATC TTTTTGTAAA AGAGATCAGC CGCGCCAGAA CCTTTGGTTT TATGAAAAGT
GTAGAATATT TACAATCAAA TAATTTAGCC TTAGGGGCTA GTTTGGATAA TGCGATTGGT
TTAGATGAGT TTCGGGTATT AAATCCTGAT GGTTTACGTT ATGAAGACGA GTTCGTAAAA
CATAAAGTAC TGGATGCCAT TGGTGACCTT TATCTTTCTG GTTATACTAT TTTAGGTCAT
CTTAAAGCCT TTAAAACAGG ACATGCACTT AATAACCAAC TTTTGTGTGC TTTATTAGCA
GACCAAGAAG CTTGGGAAAT GGTCACCTTT GAAGAGCCAG TAAGTGAATC CCCCATTCAA
TACGTATCTC CTGTTTTTGC TCTCTAA
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| Protein sequence | MIKQRTLKKS VKSIGIGLHS GNKVKIEFHP APANSGIVYR RTDLDPIVSF KAHAQAVQET
LLCTCLVNDQ GQKISTVEHL SAALAGLGID NIIIDVDAPE IPIMDGSASP FIFLLQSAGI
EEINSPKKFI RIKKMVRVED EKEGKWAELH PSNKGFSLDF KIDFDHPVFE GQNQHIKMDF
SGDLFVKEIS RARTFGFMKS VEYLQSNNLA LGASLDNAIG LDEFRVLNPD GLRYEDEFVK
HKVLDAIGDL YLSGYTILGH LKAFKTGHAL NNQLLCALLA DQEAWEMVTF EEPVSESPIQ
YVSPVFAL
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