| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1136 |
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| Symbol | |
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| ID | 4623877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 1424817 |
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| End bp | 1425287 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639796351 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_942572 |
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| Protein GI | 119944892 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00404994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.955793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTC AGTTAATCGC AGTCGGCACA AAGATGCCCG ACTGGGTTGA AAAAGGATAC
CAAGAATATG CGCGACGCTT TCCAAAAGAG ATGCAACTTG AATTGCTGGA AATCAATGCT
GGGAAGCGTG GTAAAAATGC GGATATAAAA CGGATATTGA AAAAAGAGGG GGAATTGACC
CTTGCAGCAA TCCCCAAAGG TAATAAAATT GTCACACTGG AAGTGACGGG ACAAGCATGG
ACAACTGAAC AGCTTGCCGA TGAGATGGGC AAATGGCAGT TAGATGCAAG AAATATTAGT
TTATTAATCG GTGGACCTGA AGGGCTTGCG CCTGAATGCA TTACAAAGTC TGAACAACGC
TGGTCACTTT CAGCGTTAAC CTTGCCCCAT CCTTTAGTAC GAGTTATCGT CGCCGAAAGT
TTATATCGCG CTTTTACTTT AACAATTAAC CACCCATACC ATAGAGAATA A
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| Protein sequence | MKIQLIAVGT KMPDWVEKGY QEYARRFPKE MQLELLEINA GKRGKNADIK RILKKEGELT
LAAIPKGNKI VTLEVTGQAW TTEQLADEMG KWQLDARNIS LLIGGPEGLA PECITKSEQR
WSLSALTLPH PLVRVIVAES LYRAFTLTIN HPYHRE
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