| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1130 |
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| Symbol | |
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| ID | 4625050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1418079 |
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| End bp | 1418705 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639796345 |
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| Product | channel protein, hemolysin III family protein |
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| Protein accession | YP_942566 |
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| Protein GI | 119944886 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00435698 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATTACG GTGAGAGACT CAATAGCATC ACGCATCTGG TGGGGGCGGT TTTAGCCCTC
ATTGGTTTTG GTGTATTATT AACACTGGCT ATGCAAGAGA ATAATTGGCG AATATTGGTC
AGTTTTACTA TTTTTGGCTT TACCCTTGTG CTGCTTTATT CTATGTCTAC TTTGTATCAC
AGCTTGCACT CTCCGAAACT TAAAAAAATA TTCCAGAAGC TCGATCACAT CTCAATTTAC
CTGTTAATCG CAGGCACCTA TACACCTTAC ATGCTGGTCT CATTAGAAAA TAATAACGGT
CTGCTGATGC TGATAATAGT ATGGGGATTA GCTATTATTG GTTTACTCGT CGATATGTTG
GTTAGCAAAC GTATTGAATG GTTACAAGTG TCAATTTATT TGTTAATGGG CTGGATTTGC
CTGTTTAATT ATTCACAATT TCAGGCCGCT ATCCCCGCTG CAGGGATGAT TTGGCTGACC
GTTGGGGGAA TAGCTTATAC GGCAGGTATT CTTTTTTATA TTTTGGACAC GCTGAATAAA
TTAACCCATG CTCATGGCAT CTGGCACCTG TTTGTTTTAT CGGGCTCTAT CTGCCATTTC
ATCTCTATTG CTGGATATGT CAGATGA
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| Protein sequence | MYYGERLNSI THLVGAVLAL IGFGVLLTLA MQENNWRILV SFTIFGFTLV LLYSMSTLYH
SLHSPKLKKI FQKLDHISIY LLIAGTYTPY MLVSLENNNG LLMLIIVWGL AIIGLLVDML
VSKRIEWLQV SIYLLMGWIC LFNYSQFQAA IPAAGMIWLT VGGIAYTAGI LFYILDTLNK
LTHAHGIWHL FVLSGSICHF ISIAGYVR
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