Gene Ping_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1102 
Symbol 
ID4626232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1376400 
End bp1377236 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content37% 
IMG OID639796319 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_942540 
Protein GI119944860 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.198189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AAACACTACT GACGGATTGC CCTGACAGCA AAGGTCTGAT TGCTCAAATC 
ACCAATATTT GCCACAAGCA TCAGTTAAAT ATTATTAAAA ATAATGAATT TGTCGACCAC
CAGCATGGGC GTTTTTTTAT GCGTACTGAA ATTGAAGGTT ATTTCAATGA TCAGACGCTA
TTAGCCGATT TAGATTTTAG CTTACCAAAA GGCTCTCATC GGGCATTAAT CTCAGCACAA
AAAAAACGTA TTGTCATTTT GGTCACCAAA GAAGCCCATT GTCTTGGTGA TATTTTAATG
AAAAGTACTT ACGGTGGTCT TGATGTTGAA ATTGCAGCTG TTATTGGTAA TTACAATACA
CTCGAAGAGT TAGTGACTAA GTTTAATATC CCCTATCATA CCGTCAGTCA TGAAGGTTTA
AATCGTGAAG AGCATGAAAA AAAAGTGCTA GAGGCTATTT CGCCCTATGC GCCTGACTAT
GTGATTCTGG CTAAATATAT GCGCATTTTA ACGCCTGAAT TTGTTAAGGT TTATCAAAAT
AAACTGATTA ATATTCATCA CTCATTTCTG CCCGCGTTTA TTGGTGCTAA ACCCTATCAG
CAAGCCTTCG ATCGTGGAGT GAAAATTATT GGCGCGACGG CTCACTTTGT CAATAATGAC
CTTGATGAAG GACCTATTAT TACTCAAGAT GTAACCCACA TTGATCATTC TTATACTGCT
GATGATTTAG TAAAAGCAGG ACGAGATGTA GAAAAATCTG TATTAAGCCG TGCATTACAG
CAGGTATTAG ATGACAAAAT TTTTGTTTAT GCTAATCGCA CCGTGGTTTT TCAATAA
 
Protein sequence
MEKKTLLTDC PDSKGLIAQI TNICHKHQLN IIKNNEFVDH QHGRFFMRTE IEGYFNDQTL 
LADLDFSLPK GSHRALISAQ KKRIVILVTK EAHCLGDILM KSTYGGLDVE IAAVIGNYNT
LEELVTKFNI PYHTVSHEGL NREEHEKKVL EAISPYAPDY VILAKYMRIL TPEFVKVYQN
KLINIHHSFL PAFIGAKPYQ QAFDRGVKII GATAHFVNND LDEGPIITQD VTHIDHSYTA
DDLVKAGRDV EKSVLSRALQ QVLDDKIFVY ANRTVVFQ