| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1101 |
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| Symbol | |
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| ID | 4625814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1371809 |
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| End bp | 1375699 |
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| Gene Length | 3891 bp |
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| Protein Length | 1296 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639796317 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_942539 |
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| Protein GI | 119944859 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0458286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCATTT CTGCTGCTAC TTTAAAAAAA CATCTCTCCC AGGCTTTATA CCAAGACCAA
TTTGCTTTGG CGCGTCGTAT TGATGCAGCT AAAAAACAAA AAACAGCTGA AAAAGTAGAG
CATGCTCTGG TTAAAGTAGC CTGCGATATT CAGTCATCAA TCGATGTACG CGCCTTGCGA
CTACTCAATT TACCTAAAGT GAGTTACCCG CCAAACTTAC CCGTGAGCCA GAAGAAAGAT
GATATTTTGG CTACTATTCG TGATAACCAA GTGGTTATTA TTGCCGGGGA AACTGGATCG
GGTAAAACCA CTCAGATCCC TAAAATTTGT TTAGAGCTAG GTCGTGGTGT GTCGGGCCTG
ATCGGCCACA CGCAGCCCAG GCGAATTGCG GCACGTACAG TGGCCAACCG TATTGCTGAA
GAGCTTGATT CTATTGTGGG TGAAACGGTC GGTTACCGGG TACGTTTTAC GGATAAAGTC
AGCGAACGGT CTTATATTAA GTTAATGACC GACGGTATTT TATTGGCTGA AATTCAAAAC
GATCGTTTTT TAAGTAAATA TGACACTATT ATTATCGATG AAGCCCATGA GCGCAGTCTG
AACATCGATT TTTTATTAGG TTATCTGAAA CGTTTATTAC CGCGCCGTCC GGATCTTAAA
GTTATTATCA CTTCTGCGAC TATTGATCCC GAACGCTTTT CCAACCATTT TATCTCTGCC
CGTGGTAAAA AAGCGCCGAT CATTGAAGTC TCCGGCCGTA CTTTTCCCGT TGAAACCTTA
TATCGTCCGT TAGAAGATTA TGCGGGGGGT GATCAAATTG AAGGTATCTT TAACGCAGTC
GATGAGTTAC AGCGCTTAGG GCGTGGTGAT ATTCTGATCT TTATGAATGG TGAACGAGAA
ATTCGAGATA CAAGCGACGC ACTAAACCGC CGTAATTTAC GTGATACTGA AGTATTACCG
CTGTTTGCGC GGTTAAGTGT TGCCGAGCAG AATCGTATTT TCCAACCGCA TCAAGGCCAG
CGTATTGTGT TAGCAACTAA CGTGGCAGAG ACCTCCCTTA CGATCCCAGG TATTAAATAT
GTTATTGATA CCGGTACAGT GCGTATTAGT CGCTACAGTT ACCGTACTAA GGTACAACGT
TTACCAATTG AACCTATTTC ACAAGCAAGT GCAAATCAGC GTACAGGGCG TTGCGGACGT
GTCAGTGAAG GGGTGTGTAT TCGCCTTTAT AGTGAAGATG ATTTCCTTGC CCGTCCGGCG
TTTACCGATC CGGAAATTCT ACGCACCAAT CTTTCATCGG TTATTTTACA GATGCTCTCG
TTAGGCCTCG GCGATCTTAA TAAATTCCCC TTTGTGCAAC CGCCTGAAGA TCGTAATATT
AAAGATGGTT TAGTCTTATT AGAAGAGTTA GGGGCCGTTG ATCTTACCCT TCAGGAAGCG
CAGAAAAAAC TTACCCCCTT GGGCAGGCAA TTAGCTAAAC TGCCCGTTGA TCCACGTTTG
GCACGAATGA TTTTAGCGGC GCAAGAGTAT GGTTGTGTGC ATGAAGTGAT GGTGATAAGT
GCAGCATTAA GTATTCAGGA TCCGCGTGAA CGGCCAATGG ATAAACAACA AGCCGCCGAT
GAAAAGCATC GCCGATTTGT TGACAAAAAT TCCGATTTTA TCGCTTTTGT GAATCTTTGG
GATTATATCA AAGAGCAGCG TCATGAGCTT TCTAGCAGTC ACTTTCGTAA AATGTGTCAA
AAAGAGTTTC TGGCTTACAT GCGGGTGCGC GAGTGGCAGG ATATCTATAC GCAAATTAAA
CAGGTTATTG ATGAGTTAGG CATTAAAATC AATAGCGAAG CGTCAAATTT TGATGCTATT
CATCAAGCGT TATTAGGGGG GTTATTATCG CACATAGGTT TTAAAGACAA AGAAGCTGAA
TACCTCGGTG CGCGTAACAG TAAGTTCTAT CTGTTTCCAG GATCTGCTCT GTTTAAAAAA
CAGCCCAAAT GGATAATGGC GGCTGAATTA GTGGAAACAG CGAAACTGTT TGGACGAACG
GCTGCACGTA TCAAACCTGA ATGGATTGAA CAGCAGGCAC AACACTTAAT TAAACGCAGT
TACAGTGAGC CGCATTGGCA GAAAAAGCTG GGGGTGGTTG GCGCATTTGA AAGCCAGATC
CTATACGGCG TGCCGATTGT TACTAAACGT AAGGTCATTT ACACAAAAAT AGATCCGCTT
TTATGCCGGG AGCTCTTTAT TCGTCATGCG CTGGTAGAAG GTGAATTTGT CACTCGTCAT
CAGTTTTTTA AAGAGAACCA ACTGTTACTT GAAGATATTG AGGAATTAGA GCATAAATCC
CGTCGCCGCG ATATTTTGGT GGATGATGAC ACTTTATACT ATTTTTATGA TCAGCATATC
CCAACCGATG TAGCCAGTGC TAAACAGTTT GACAGCTGGT GGAATCGCGA AAAGGAAAAA
CAACCTGATT TATTAAATTA CCAACGCAGT TTAGTGATGG CCCACGGCGC AGATCAAGTG
ACTGAAAATG CATACCCTGA TTGTTGGCAG CAGGGAAACT TTAAGCTGCG CTTAAGTTAT
GCTTTTGAGC CCGGTACTGC TCAGGACGGA GTCTCTGTTG ATATCCCGCT GGCATTATTA
AATCAACTGC AGCCCAGTGG TTTTGATTGG CAGATACCCG CATTGCGTGA AGAATTATTA
ATTGCATTGA TTAAAACTCT GCCAAAACCA GTACGTCGTA ATTTTGTACC CGCGCCAAAT
TACGCACAGG CCGCATTGGC CGTGATGGAG CCGCTAAAAA CACCTCTGCT TGAAGCATTT
GAGAAACAAC TGCTGCGCAT GACCGGGGTA CGTATTCCGG AGAATTCATG GGATATAACG
GCATTACCAA CACATCTTAA AATAAAATTT AATATTATTG ATGAGCAGGG AAAAATCATA
AATCAAGGGA CAGATTTAAC ACTTTTACAG CATCAGTTAA AAGGAAAAGT AAAAGAGACC
TTGTCTAAAG TGTCGAAGCA GGGCATTGAA AAAACAGATT TAGTGACATG GAGTTTTGGC
AAATTACCTA AGTCATTTAG TAAAGATCAT GGCGGGTATC AAGTTAAAGC TTTCCCGGCA
CTGGTGGATA AAAAGAAAAG TGTTGCCATT GAACTGTTTG ACAGTGAACA AAAAGCCGCT
CAAATGAGCC GCGAAGGTCT GCGCCGTTTA GTCTTATTAA ATGTGCCGTC ACCCATTAAA
TATCTGCAAA AAAGTTTGCC TAATAAGGCC AAATTAGGCC TCTATTTTAA TCCCTTTGGC
CAAGTAAAAG AGTTAATTGA TGATTGTATT AACTGTGCTA TTGATACGAT TTTAAAGGAT
CAAAAAAGCC CCAGTACAGA AGCTGAATTT GAAGTGGAAA AAGAGAAAGT ACGTGCAGAA
TTGGCTGACA CAACATTAAA AATCACGCAG TTGGTTGAAC AGATATTAAC CCTCGCTTAT
GCGGTGAATA AAAAACTCAA GGGAAAAATT GATTTAACTC TGCTGGTGGC CCAGGGAGAT
ATTAAAGCGC AATTAAATCG TCTTATTTTC CCTGGATTTG CTTGTCAGGT TGGAGAGGCT
AAATTAACGG ATTTAAAACG TTATTTAATG GCATTGGAAA AACGCTTAGA AAAGCTTCCT
GTCAATCCAA ACCAGGATCG TCTGCATACT ATCGCACTCA ATGAGTTAGA AACGCGTTAC
CATAGTCTTT GTAAAACCCT ACTTGCAAGC GAAAATGATA ATGAACAATT AGCTGAAATC
TATTGGATGA TGGAGGAGTT AAGGGTGTCT TTATTTGCGC AGCAGTTAGG CACCGCTTAT
CCCGTTTCAG AAAAACGTAT CAAATTAAAG TTAGCTGAAT TAAAGGGATA A
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| Protein sequence | MTISAATLKK HLSQALYQDQ FALARRIDAA KKQKTAEKVE HALVKVACDI QSSIDVRALR
LLNLPKVSYP PNLPVSQKKD DILATIRDNQ VVIIAGETGS GKTTQIPKIC LELGRGVSGL
IGHTQPRRIA ARTVANRIAE ELDSIVGETV GYRVRFTDKV SERSYIKLMT DGILLAEIQN
DRFLSKYDTI IIDEAHERSL NIDFLLGYLK RLLPRRPDLK VIITSATIDP ERFSNHFISA
RGKKAPIIEV SGRTFPVETL YRPLEDYAGG DQIEGIFNAV DELQRLGRGD ILIFMNGERE
IRDTSDALNR RNLRDTEVLP LFARLSVAEQ NRIFQPHQGQ RIVLATNVAE TSLTIPGIKY
VIDTGTVRIS RYSYRTKVQR LPIEPISQAS ANQRTGRCGR VSEGVCIRLY SEDDFLARPA
FTDPEILRTN LSSVILQMLS LGLGDLNKFP FVQPPEDRNI KDGLVLLEEL GAVDLTLQEA
QKKLTPLGRQ LAKLPVDPRL ARMILAAQEY GCVHEVMVIS AALSIQDPRE RPMDKQQAAD
EKHRRFVDKN SDFIAFVNLW DYIKEQRHEL SSSHFRKMCQ KEFLAYMRVR EWQDIYTQIK
QVIDELGIKI NSEASNFDAI HQALLGGLLS HIGFKDKEAE YLGARNSKFY LFPGSALFKK
QPKWIMAAEL VETAKLFGRT AARIKPEWIE QQAQHLIKRS YSEPHWQKKL GVVGAFESQI
LYGVPIVTKR KVIYTKIDPL LCRELFIRHA LVEGEFVTRH QFFKENQLLL EDIEELEHKS
RRRDILVDDD TLYYFYDQHI PTDVASAKQF DSWWNREKEK QPDLLNYQRS LVMAHGADQV
TENAYPDCWQ QGNFKLRLSY AFEPGTAQDG VSVDIPLALL NQLQPSGFDW QIPALREELL
IALIKTLPKP VRRNFVPAPN YAQAALAVME PLKTPLLEAF EKQLLRMTGV RIPENSWDIT
ALPTHLKIKF NIIDEQGKII NQGTDLTLLQ HQLKGKVKET LSKVSKQGIE KTDLVTWSFG
KLPKSFSKDH GGYQVKAFPA LVDKKKSVAI ELFDSEQKAA QMSREGLRRL VLLNVPSPIK
YLQKSLPNKA KLGLYFNPFG QVKELIDDCI NCAIDTILKD QKSPSTEAEF EVEKEKVRAE
LADTTLKITQ LVEQILTLAY AVNKKLKGKI DLTLLVAQGD IKAQLNRLIF PGFACQVGEA
KLTDLKRYLM ALEKRLEKLP VNPNQDRLHT IALNELETRY HSLCKTLLAS ENDNEQLAEI
YWMMEELRVS LFAQQLGTAY PVSEKRIKLK LAELKG
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