Gene Ping_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1070 
Symbol 
ID4625364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1344303 
End bp1345382 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content36% 
IMG OID639796286 
Producthypothetical protein 
Protein accessionYP_942508 
Protein GI119944828 
COG category[S] Function unknown 
COG ID[COG3249] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0277153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGTTA TATTAATGAA ACCAATATTT GTTGTGCGTA ATTTTATTGT CCTATTTATT 
TCGTTCATCT CTTTCACGTC TTGCGTGTTA GCCAACCAGT TTGAAAACCT TTATCAGGGA
AATATTATTG TAGAGAACCA GAGTGAACAG CAGTTAAAGG AGCTGGCATT ACAGCAAGTA
TTAATTAAAG TGTCAGGCAA CTCGCAGGTC AATATACTGG ATGAAAGCCA ACAATTATTG
ACAAAAACAC AAAGTCTATT ATCTCAATTT GGTTATCGTA ATATTGAAGA TAATCGCTAT
TTTATGGCGG TGTTTGATCC CAGTAAAATA AATCAGGCAT TAAAAGAGAT GCGCCAGCCT
GTTTGGGGTG AAACTCGGCC CCGGACATTA GTTTGGTTAA TTGTCGATAG TGACAGTGAA
CGTAAACTTA TTTCAGATAC TATGATTAAC AGTGATCAGG ATGATGTGCT TTCTTTCGTA
CTTAAAAGTA CACAGCAGGA GCGCGGTATT AGCTTACACT TTCCGCTAAT GGATCTTGAT
GATAATTTGG CGGTCTCTCT CTTCGATATT TCTGGGCGGT TTTTTGATCA GATAGCAAAG
GCTTCTGAGC GTTATGATGC CAGCCTGTTT ATTGTTGCTA ATTTAAAACA AAAAGATGAA
AAAACATGGG ATTTGCAGTG GGAATTAGTT TATAACACCC CACAATCAAA GAAAAATGAA
ATAGTTGCAT CGGAGCAATT ACATGGTGAA AAAAGTGTTA TTTTAACCAG TATGACCAAC
AAGATTGCTG ATTATTATGC TGACCAATAT GCAATATTAG CAACGGATAC TGAGAAATTT
TCGCAAAGTA TTTACATCAG CGGGATCAGT TCATTGCAAC AGCATGAAAA ATTAAATCAA
GTACTATCAG GTATTCTGGC AATTGCATCC TATGAAGTCG TCAGCGTTGA TGTGAAGCAG
GTAAAGGTCA ATGTGAAGGT CAATGGTGGC ATTAATAGTT TTGAAAATGC ACTTAATATA
CAAACTAACT TACAATTAGA TGCTTCTCAA AGTGAACGTT TTCACTTTAA CTGGCGTTAA
 
Protein sequence
MVVILMKPIF VVRNFIVLFI SFISFTSCVL ANQFENLYQG NIIVENQSEQ QLKELALQQV 
LIKVSGNSQV NILDESQQLL TKTQSLLSQF GYRNIEDNRY FMAVFDPSKI NQALKEMRQP
VWGETRPRTL VWLIVDSDSE RKLISDTMIN SDQDDVLSFV LKSTQQERGI SLHFPLMDLD
DNLAVSLFDI SGRFFDQIAK ASERYDASLF IVANLKQKDE KTWDLQWELV YNTPQSKKNE
IVASEQLHGE KSVILTSMTN KIADYYADQY AILATDTEKF SQSIYISGIS SLQQHEKLNQ
VLSGILAIAS YEVVSVDVKQ VKVNVKVNGG INSFENALNI QTNLQLDASQ SERFHFNWR