Gene Ping_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1029 
Symbol 
ID4624172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1297829 
End bp1299361 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content46% 
IMG OID639796245 
Producthistidine ammonia-lyase 
Protein accessionYP_942467 
Protein GI119944787 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0827766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAT TACATATTAA ACCGGGACAA TTAACACTTT CTCAACTGCG TAAAATCAGC 
CGTCATGCGC TTAAAGTCAG CTTAGAATCA AGTTGTATTG AGGCCATTCA TGCCAGTACA
CAAGTTGTCA ATCAAGTGAT TGCAGAAAAT AGGGTTGCTT ATGGTATTAA TACCGGTTTT
GGTTTGCTGG CTAATACTCG AATCGCCCCG GAAGACTTGG AAACACTGCA GCGCAGTATT
GTCCTTTCCC ATGCGGCGGG TATCGGCGAA TTGATGAATG ATGAAACCGT GCGGATGATG
ATGGTATTAA AAATCAACAG TCTGGCGCGG GGTTTTTCAG GGATTCGTTT ATCTGTTATT
GAAGCATTAA TGACACTGGT AAATGCACAG ATTTACCCTT GTGTGCCCAA AAAAGGGTCA
GTGGGTGCAT CGGGTGATTT AGCACCATTA GCACACATGA GTACGGTGTT ACTAGGTGAA
GGTGAAGCGC GTTATCAGGG AAACATAATT TCAGGTGCAA AAGCGTTAGA AATTGCCGGC
ATGCAGCCTA TTACTTTGGC TCCTAAAGAA GGACTCGCAT TATTAAACGG TACTCAGGCA
TCCTGTGCTT TTGGCCTGGA AGGGCTATTT GCCGCTGAGG ATCTGTTCGC TTCTGCCACT
TTATGCGGCG CAATGACGGT CGATGCCGCA TTAGGCAGCC GTCGTCCCTT TGATGACCGG
GTACATCAAG TACGCGGTCA TCAATCACAA ATAGATTCAG CTTTAATCTA TCGTCATATA
CTCGATACAC ACAGTGAAGT AAGTCATTCA CATACAGCCT GTGAAAAAGT GCAGGATCCC
TACTCTCTTC GCTGTCAGCC CCAGGTAATG GGGGCCTGTT TACAGCAAAT TCGTAATTCT
GCCGCTATTT ATGAAATTGA AGCAAATTCT GTCTCGGATA ATCCGCTGGT CTTTGCCGAG
GATGGTGATA TTATTTCTGC CGGTAATTTC CATGCTGAAC CTATTGCTAT GGCCAGTGAT
AATTTAGCCT TAGCCATTGC TGAAATTGGC AGTTTATCTG AACGCCGTAT GGCATTGTTA
ATTGACAACA GTTTAAGTAA ATTACCGCCC TTTTTGGTCA ATAACGGCGG CGTTAACTCC
GGCTTTATGA TTGCTCAGGT AACGGCAGCG GCGCTTGCCA GCGAAAATAA ATCCCTCGCT
CACCCGGCCT GTGTGGACAG CCTGCCAACA TCGGCCAATC AGGAAGATCA CGTTTCAATG
GCAACCTTTG CCGGTCGGCG CTTAAAAGAG ATGGCGGAAA ACACCCGCGG TATTTTAGCG
GTGGAGTTAT TGGCCGCAGC CCAGGGGCTG GATTTTAGAT CCCCGTTAAA ATCCTCTGAA
TTAATAGAAA CAGCCAAGGC TGAATTACGG GAGCGGGTTG ATTTTTATGA TAAAGACAGA
TATTTCGCAC CCGATATTAA ACAGGCAAAT CAGTTGTTAA TTGAAGCCAT GCATAACAAA
CTGATCCCGG AAGGTTTACT GCCGAGCCTT TAA
 
Protein sequence
MYELHIKPGQ LTLSQLRKIS RHALKVSLES SCIEAIHAST QVVNQVIAEN RVAYGINTGF 
GLLANTRIAP EDLETLQRSI VLSHAAGIGE LMNDETVRMM MVLKINSLAR GFSGIRLSVI
EALMTLVNAQ IYPCVPKKGS VGASGDLAPL AHMSTVLLGE GEARYQGNII SGAKALEIAG
MQPITLAPKE GLALLNGTQA SCAFGLEGLF AAEDLFASAT LCGAMTVDAA LGSRRPFDDR
VHQVRGHQSQ IDSALIYRHI LDTHSEVSHS HTACEKVQDP YSLRCQPQVM GACLQQIRNS
AAIYEIEANS VSDNPLVFAE DGDIISAGNF HAEPIAMASD NLALAIAEIG SLSERRMALL
IDNSLSKLPP FLVNNGGVNS GFMIAQVTAA ALASENKSLA HPACVDSLPT SANQEDHVSM
ATFAGRRLKE MAENTRGILA VELLAAAQGL DFRSPLKSSE LIETAKAELR ERVDFYDKDR
YFAPDIKQAN QLLIEAMHNK LIPEGLLPSL