Gene Ping_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1013 
Symbol 
ID4626266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1274344 
End bp1275912 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content41% 
IMG OID639796229 
ProductABC transporter ATP-binding protein 
Protein accessionYP_942451 
Protein GI119944771 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.563969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTG GCGCTGAGCC TTTGTTTGAA AATATTTCAG CTAAATTTAG TAAGGGCAAC 
CGCTATGGTC TAATTGGCGC GAATGGTTGC GGCAAATCTA CTTTTATGAA AATCCTCAGT
GGTGAGCAGG CACCAAGCTC AGGTAATGTG TCTCAGTCAG TGGGGCTTAA AGTAGGTATT
CTAAGCCAGG ATCAATTTGC GTTTGAGCAA TATAATGTTA TTGATGTTGT CATAATGGGC
GATCTTGCAT TATGGAAAGT TAAACAAGAA CGTGATCGTA TCTACGCAAA AGCTGAAATG
ACTGAAGCCG ATGGGATGGC TGTTGGCGAA TTGGAAAGTG AATTTGCTGA AATGGATGGT
TACACCGCAG AAAGTCGTGC CGGTGAAATT TTGTTATCCG CGGGTATTGA AGAAGAATTT
CATTTTGGCT TGATGCAGCA GGTTGCACCG GGTTGGAAAT TACGTGTACT GCTTGCACAA
GCATTGTTTG CTAATCCCGA CCTTCTGCTG CTTGATGAGC CTACCAATAA CCTGGACATT
AATACTATTG ACTGGTTATC GGGCGAGCTT AACCAGCGTA AATGTACCAT GATCATTATT
TCTCATGACC GACATTTTTT AAACTCAGTC TGTACACATA TGGCTGATAT TGATTACGGT
GAATTACGTA TTTACCCCGG TAATTATGAA TACTTTATGG CCGCAGCAGG TTTGATTCGT
GAACAATTAT TGGCCGAAAA TTCCAAGAAA AGTGCTGAAA TTAACGAATT ACAAGACTTT
GTTAACCGCT TTGGCGCCAA TGCCTCTAAA GCAAAACAGG CGAGTTCGCG CGCTAAAAAG
ATGGATAAAA TTAAACTTGA TGAAGTTAAA CCATCAAGTC GTATGTCACC TTCATTGAGT
TTTCCAGAGG GTAAAAAAAT GCACCGCCAG GCATTAATAC TGGAAGATAT TGGCCACGGT
TTTGATGATC AGATGTTATT TGAAGGTGGT GAACTGATTT TAGAAGCCGG CGCAAAATTA
GCCGTGATCG GTGAAAACGG TGTGGGTAAA TCCACTTTTC TGCGTTGTTT AGTGAATGAA
CTGCAAAACA AAGAAGGTGT GGTTAAGTGG TCTGAAAATG CATCTGTTGG TTATTGCCCG
CAGGATAGTA CTGCTGACTT TGATAATGAC TTAAATCTGT TTGATTGGAT CTCACAGTGG
CGCACCATTA AACACGATGA CCTTATCGTA CGGGGTATGT TGGGCCGTTT ATTATTTACC
GCCGATGATG CTAATAAAAA AGCCAGAAAT TGCTCCGGTG GTGAAAAAAA TCGCCTGCTA
TTTGGTAAGT TAATGATGCA GGATATTAAT GTATTAGTCA TGGATGAGCC GACTAACCAC
ATGGATATCG AAGCGATTGA TGCCTTAAAT GATGCCCTGA AAGTTTATCA GGGTACCTTG
ATTTTTGTCA GTCATGACCG CAAATTTGTT TCATCGTTAG CGACGCGCAT TATTGATATT
AAAGATAAAA AATTGGTTAA CTTCCAGGGT ACTTATAATG AGTATGTTGC TAATCAACGT
TTTGCTTAA
 
Protein sequence
MQFGAEPLFE NISAKFSKGN RYGLIGANGC GKSTFMKILS GEQAPSSGNV SQSVGLKVGI 
LSQDQFAFEQ YNVIDVVIMG DLALWKVKQE RDRIYAKAEM TEADGMAVGE LESEFAEMDG
YTAESRAGEI LLSAGIEEEF HFGLMQQVAP GWKLRVLLAQ ALFANPDLLL LDEPTNNLDI
NTIDWLSGEL NQRKCTMIII SHDRHFLNSV CTHMADIDYG ELRIYPGNYE YFMAAAGLIR
EQLLAENSKK SAEINELQDF VNRFGANASK AKQASSRAKK MDKIKLDEVK PSSRMSPSLS
FPEGKKMHRQ ALILEDIGHG FDDQMLFEGG ELILEAGAKL AVIGENGVGK STFLRCLVNE
LQNKEGVVKW SENASVGYCP QDSTADFDND LNLFDWISQW RTIKHDDLIV RGMLGRLLFT
ADDANKKARN CSGGEKNRLL FGKLMMQDIN VLVMDEPTNH MDIEAIDALN DALKVYQGTL
IFVSHDRKFV SSLATRIIDI KDKKLVNFQG TYNEYVANQR FA