Gene Ping_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1009 
Symbol 
ID4626262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1269300 
End bp1270865 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content43% 
IMG OID639796225 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_942447 
Protein GI119944767 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTAA CGGATTTTGC AACCTCACCC CTGTCGGTTA TGCCGGCAGT GGTCGCATTA 
GGTTTGGCAA TTATTACCCG TCGTGTTTTG CTCTCTTTAG GATTAGGTAT CGTTTTTGGT
GCGTTATTAT TGGTGGATTT CTCATTTTCG AAGGGTACGA TTTATATTCT GACCACGGTT
AAAAGTGTCT TGATCGATGA GGGCGGAATC AATACTTGGA ATATGAGTAT AGTGGGCTTT
TTGTTACTGC TGGGAATGAT GACAGCACTG TTAACGCTTT CGGGTGGCAC GCGTGCCTTT
TCTTTATGGG CACTCAATCA TATTAAAGAT AAACGCGGCG CATCACTGTT AGCTGCATTT
TTAGGTGTGT TCATTTTTAT TGATGATTAC TTTAATAGCT TGGCAGTCGG TTCAATTGCT
CGGCCAGTGA CGGACAGGTT CAATGTTTCT CGTTCAAAAT TAGCTTATAT ACTGGATTCG
ACCGCAGCGC CCATGTGCAT TCTCATGCCA CTTTCGAGCT GGGGGGCTTA TATTATGACT
ATTATTGGCG GTATTTTATT AAGTCACGGT ATTACTGAAT ACTCAGCATT AGGTGCTTAC
GTCAGACTGA TACCAATGAA CTTTTATGCC GTCTTTACCC TGTTAATGGT GTTTGCGGTT
ATTTGGTTTA AGCTTGATAT TGGTTTAATG AAAAACCATG AAATTGAAGC AGAAAAAAAT
GGCGCACAAA CAAAAGGTGA TCATCAAGCC GTCGATCTGC ATGATGAATT TGGCATAAAC
GAAAGTGAAC AAGGGAAAGT CTCAGATCTT GTTTTACCTA TTTTTGCGCT AATTGCAGGC
ACCCTGTTTT TTATGCAGTA CACAGGAAAT CTCGCCCTGG CGGCCAGTGG AAAACCGTTT
TCAGTGTTAG GTGCCTTTGA GAATACCGAT GTGGGTATGT CTCTTTGTTA CGGTGCGCTG
GTCGGATTAG CATTTACCTT ATTCACTGTA CTAAAACAAA AAATAGCCTT TAAGTTAATT
TTTCACGCCG CCTGGATTGG TGGCCGATCT ATGTTTGGTG CTATTATTAT CCTGTTTTTT
GCCTGGGCAA TCGGCACTGT GATAGGCGAT ATGAAAACTG GGGCTTACTT ATCTTCATTG
GTACAAGGTA ATATCGGGGT GCAGTGGTTA CCAGTTATTA TGTTTGTATT ATCCGGGGCA
ATGGCTTTTT CTACCGGTAC CTCATGGGGT ACCTTTGGCA TTATGCTGCC GATTGCCGGT
GATATGTCAG GTGCGACAGA GCTCAGCTTA ATGTTGCCTA TGTTAAGCGC GGTACTGGCG
GGCTCTGTCT TTGGCGATCA CTGTTCACCT ATCTCCGATA CAACTATACT CTCTTCAACG
GGCGCACGTT GCAGGCATAT CGATCATGTA GCAACCCAAT TACCCTATGC ATTATCCGTT
GCCGGCGTTT CTGCCGTTGG TTTTGTGGTG ATTGGCTTTA CCAATTCCCT GAGCCTCTCT
TTGGTCGCTT CGTTTATCGC TTTTAGCGCG CTTATTTTTG TGATGAAATT CTTGTCTAAG
AGGTAA
 
Protein sequence
MILTDFATSP LSVMPAVVAL GLAIITRRVL LSLGLGIVFG ALLLVDFSFS KGTIYILTTV 
KSVLIDEGGI NTWNMSIVGF LLLLGMMTAL LTLSGGTRAF SLWALNHIKD KRGASLLAAF
LGVFIFIDDY FNSLAVGSIA RPVTDRFNVS RSKLAYILDS TAAPMCILMP LSSWGAYIMT
IIGGILLSHG ITEYSALGAY VRLIPMNFYA VFTLLMVFAV IWFKLDIGLM KNHEIEAEKN
GAQTKGDHQA VDLHDEFGIN ESEQGKVSDL VLPIFALIAG TLFFMQYTGN LALAASGKPF
SVLGAFENTD VGMSLCYGAL VGLAFTLFTV LKQKIAFKLI FHAAWIGGRS MFGAIIILFF
AWAIGTVIGD MKTGAYLSSL VQGNIGVQWL PVIMFVLSGA MAFSTGTSWG TFGIMLPIAG
DMSGATELSL MLPMLSAVLA GSVFGDHCSP ISDTTILSST GARCRHIDHV ATQLPYALSV
AGVSAVGFVV IGFTNSLSLS LVASFIAFSA LIFVMKFLSK R