Gene Ping_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0989 
Symbol 
ID4626578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1248602 
End bp1249282 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content47% 
IMG OID639796206 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_942428 
Protein GI119944748 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00421455 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.304991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC AGAAAATAGT GTTAATCACA GGTGCATCCA GCGGTATCGG TAAAGCCACA 
GCCAAAACGT TAGTCAAAAG TGGACATAAG GTAATACTGA CCGCCCGCAG ACAAGAAAAA
TTGGATAAAC TGGTAGCAAT GCTAGGGGAA GATAACGCTC TGGCTGTTGC CGCCGATGCC
ACCCAATTTG ATGCATTAGA AAAGGTAGTA AAAGCTGGCA TCAACAAGTT TGGCAGACTG
GATGTGGCCT TCGCTAACGC GGGCACCGGA ATATCCATTT CAGGTACAGA ACAGGGAGAT
CCAGATGAGT GGTCAAAACT GATCGATATC AACATCAAAG CCTTGTTATG GACGGCCAAG
TTAACTCTAC CCAACTTGCG TGAGACCAAG GGGCATTTTA TTTTAACCAG CTCAGTGGCC
GGGCGTACGG CACATAAAGG TTCCATTTAC GGTGCCAGTA AATGGTTTGC TTATGGCTTT
GGTCAGAACT TGGCTGAAGA AATGGCTCAA TGGGGCGGAC GCTGCACCAC CATTGCCCCT
GGCATGGTCA ACACTGCGTT TTTTGATGAG CCTAAACCCG ATAAATTAGA CCCGGTTGAT
GTCGCTGAAG CGGTACTATT TGCTATTGAA GCTGAGCAGC GTTGTAATGT GCGTGAAATC
TTTCTGATGC CAACCCACTA A
 
Protein sequence
MTKQKIVLIT GASSGIGKAT AKTLVKSGHK VILTARRQEK LDKLVAMLGE DNALAVAADA 
TQFDALEKVV KAGINKFGRL DVAFANAGTG ISISGTEQGD PDEWSKLIDI NIKALLWTAK
LTLPNLRETK GHFILTSSVA GRTAHKGSIY GASKWFAYGF GQNLAEEMAQ WGGRCTTIAP
GMVNTAFFDE PKPDKLDPVD VAEAVLFAIE AEQRCNVREI FLMPTH