Gene Ping_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0988 
SymbolbaeR 
ID4626577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1247467 
End bp1248150 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content40% 
IMG OID639796205 
Productresponse regulator BaeR 
Protein accessionYP_942427 
Protein GI119944747 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000405458 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.303622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATC AAGATAAAAC GATTCTGATT GTTGAAGATG AACCGGCGCT CGCCAGCGTA 
TTATGTGAGT ACTTTATACA ATCTGGATTT CAAACGCATA TTATTGATAA TGGATTGGAA
GTCATCGACT GGGTTAAAAA TTATCAGCCC GATTTGTTGA TTCTGGATTT AATGTTACCT
GGGCGTAACG GCCTTGATAT TTATCGGGAG TTGCGCACTT TCAGTCAGGT ACCCGTGGTG
ATGGCCACCG CAAGGATTGA CGAAATTGAT CGCCTTTTAG GATTGGAATT GGGGGCAGAC
GATTACATCT GCAAACCCTA CAGTCCCAGA GAGGTGGTGA TTAGAGTTAA AAATATTTTA
CGTCGTTCCA AGGAAGGAAA CGGCACACTG CAGGGATATG CTGGATTGCA GATTGATGAA
CAAAAAATGA TGGCTTCGCT TAATCAGCAG ACGATTATTT TGACCCCGGC AGAGTTTCGT
TTATTGTCAG TTTTTAATAA ACATCCGGAA CAGGTTTTTA GTCGCGAGCA ATTAATGACC
CAAATATACT CCGATGGCCG TATTGTAACT GACCGGACGA TTGACAGTCA TATCAAAAAT
TTACGTAAAA AAATGCAGGA TGTTGCTCCG GAAAGTGAAT GTATTAAATC TATTTACGGT
ATTGGTTACA AATTAACGCT ATAG
 
Protein sequence
MNYQDKTILI VEDEPALASV LCEYFIQSGF QTHIIDNGLE VIDWVKNYQP DLLILDLMLP 
GRNGLDIYRE LRTFSQVPVV MATARIDEID RLLGLELGAD DYICKPYSPR EVVIRVKNIL
RRSKEGNGTL QGYAGLQIDE QKMMASLNQQ TIILTPAEFR LLSVFNKHPE QVFSREQLMT
QIYSDGRIVT DRTIDSHIKN LRKKMQDVAP ESECIKSIYG IGYKLTL