Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0988 |
Symbol | baeR |
ID | 4626577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1247467 |
End bp | 1248150 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639796205 |
Product | response regulator BaeR |
Protein accession | YP_942427 |
Protein GI | 119944747 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000405458 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.303622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATC AAGATAAAAC GATTCTGATT GTTGAAGATG AACCGGCGCT CGCCAGCGTA TTATGTGAGT ACTTTATACA ATCTGGATTT CAAACGCATA TTATTGATAA TGGATTGGAA GTCATCGACT GGGTTAAAAA TTATCAGCCC GATTTGTTGA TTCTGGATTT AATGTTACCT GGGCGTAACG GCCTTGATAT TTATCGGGAG TTGCGCACTT TCAGTCAGGT ACCCGTGGTG ATGGCCACCG CAAGGATTGA CGAAATTGAT CGCCTTTTAG GATTGGAATT GGGGGCAGAC GATTACATCT GCAAACCCTA CAGTCCCAGA GAGGTGGTGA TTAGAGTTAA AAATATTTTA CGTCGTTCCA AGGAAGGAAA CGGCACACTG CAGGGATATG CTGGATTGCA GATTGATGAA CAAAAAATGA TGGCTTCGCT TAATCAGCAG ACGATTATTT TGACCCCGGC AGAGTTTCGT TTATTGTCAG TTTTTAATAA ACATCCGGAA CAGGTTTTTA GTCGCGAGCA ATTAATGACC CAAATATACT CCGATGGCCG TATTGTAACT GACCGGACGA TTGACAGTCA TATCAAAAAT TTACGTAAAA AAATGCAGGA TGTTGCTCCG GAAAGTGAAT GTATTAAATC TATTTACGGT ATTGGTTACA AATTAACGCT ATAG
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Protein sequence | MNYQDKTILI VEDEPALASV LCEYFIQSGF QTHIIDNGLE VIDWVKNYQP DLLILDLMLP GRNGLDIYRE LRTFSQVPVV MATARIDEID RLLGLELGAD DYICKPYSPR EVVIRVKNIL RRSKEGNGTL QGYAGLQIDE QKMMASLNQQ TIILTPAEFR LLSVFNKHPE QVFSREQLMT QIYSDGRIVT DRTIDSHIKN LRKKMQDVAP ESECIKSIYG IGYKLTL
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