Gene Ping_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0931 
Symbol 
ID4624937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1166268 
End bp1167017 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content38% 
IMG OID639796135 
Productfumarate/nitrate reduction transcriptional regulator 
Protein accessionYP_942372 
Protein GI119944692 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.896198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATGG AAAAAAGTAA TACTAATCGA ATTCAAAGCA GTCGTTCTGC TATTCATTGT 
CAAGACTGCA GTATAAGCCA ATTGTGCATT CCTTATTCGC TCAATGAAGA TGAATTAGAG
CGTTTAGATA ATATTATAGA GCGGAAAAAA CCGATTCAAA AAGGACAAGA AATATTTAAA
GCGGGTCAAG AGATGAAATG CCTTTATGCC ATTCGCTCTG GTACGTTAAA GTCCTATACG
ATTACAGAAC AAGGTGATGA GCAAATTACT GCTTTTCATC TCGCTGGTGA TTTAATTGGT
TTTGATGCGA TTAGCTCGGG GACTCATCCA AGTTTCTCCC AAGCACTTGA AACTTCGATG
ATTTGTGAAA TTCCCTATGA CACACTGGAT ACACTTTCTA TTAGCATGCC AAAGCTGAGG
CAGCAAATAT TACGCTTAAT GAGCGGTGAA ATTGTTGGCG ATCAAAATAT GATTTTATTA
CTTTCTAAGA AAAATGCTGA AGAACGACTT GCGTCGTTTA TTTTCGACTT ATCACAGCGT
TTTGCGGCAC GAGGATTTTC ACCGAAAGAG TTTCGTTTAT CTATGACGCG TGGCGATATC
GGTAATTATT TAGGTCTCAC GGTTGAAACT ATCAGCCGTC TTTTAGGACG TTTTCAAAAA
ATGGAGATGA TTGCTGTTAA AGGTAAATAT ATTAGCATCT TAGATGATGC GCAACTGACT
CTTCTGGCTG GCGCATTGAA AAAAGATTAG
 
Protein sequence
MTMEKSNTNR IQSSRSAIHC QDCSISQLCI PYSLNEDELE RLDNIIERKK PIQKGQEIFK 
AGQEMKCLYA IRSGTLKSYT ITEQGDEQIT AFHLAGDLIG FDAISSGTHP SFSQALETSM
ICEIPYDTLD TLSISMPKLR QQILRLMSGE IVGDQNMILL LSKKNAEERL ASFIFDLSQR
FAARGFSPKE FRLSMTRGDI GNYLGLTVET ISRLLGRFQK MEMIAVKGKY ISILDDAQLT
LLAGALKKD