Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0887 |
Symbol | |
ID | 4625226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1111965 |
End bp | 1113305 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796091 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_942328 |
Protein GI | 119944648 |
COG category | [R] General function prediction only |
COG ID | [COG2056] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.801907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.982246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACC CCGTTGTACT CTCAGTCTGC GTGATGCTGG CTTTGTCTTT AATGCGTATT AATGTAGTAA TAGCATTAAC ATTAAGTGCA TTAATCGGAG GGTTAAGTGC CGGTATGTCA GTCTCTGATA CCGTCAGTGC TTTTGAAGGA GGATTGGGTG GCGGTGCAAC CATTGCATTA AGTTACGCTA TGCTGGGTGC ATTTGCAGTG GCAATTTCTA AATCAGGTAT TACCGATTTA TTAGCACAAA CAGTTATTAA TAAAGTACAT GGCAGGCACC CGGATCATTT AACCTACGTG ATAAAATATG TGGTGTTATC TTTAATTTTA TTAATAACTA TTTCATCACA GAATATTATC CCTGTGCATA TCGCCTTTAT TCCCATTTTA ATTCCACCAC TGATCAGCGT ATTTACAAAA TTACGTTTAG ACAGACGCTT AGTGGCGTGT ATATTAACCT TTGGTTTAAT CACGCCTTAT ATGGTTTTAC CGATAGGTTT TGGCGGTATC TTTTTAAATA ATATATTATT AAAAAATTTA CATGATAATG GCCTGGAAGT AACCGCCAGC CAGGTTCCAA CAGCAATGAT CTTACCTGCT TTAGGTATGG TTACCGGTTT ACTGATTGCA GTCTTTATTA GCTACCGTAA GCCACGGGAT TATCCTCAGG GAGAGTCACT ATTTACACCC GCAGAAAATC AAAAACCCGC AAAAACCCCC TTAAACAAGC GCCATATAGT GGTTGCCTTG ATTGCAATTT CAGCAACATT AAGCATACAG TTATTGTCAG GCTCGATGAT AGTCGGCGCA TTGGCTGGAT TTGTCGTCTT TACCTTTGGT GGTGTTATAG CTTGGAAAGA AACGCAAGAT GTATTTACTA AAGGTGTGCA TATGATGGCA ATGATCGGTT TTATTATGAT TGCCGCTGCC GGTTTTACAG CCGTAATGAA AGCCACGGGT AGCGTAGACA CCCTGGTTGA GATGTTATCT GCAAATATTG GCCAAAATAA ACCACTAGCA GCCGTATTAA TGCTGGTAGT CGGTTTGTTA GTGACCATGG GAATAGGCTC TTCTTTTTCA ACTATTCCAA TTATTGCCAC TATTTACGTT CCTCTTGCCC TCTCATTTGG ATTTTCACCG ATGGCAATCA TCGCATTAGT TGGAACAGCA GCGGCGTTGG GGGATGCAGG TTCACCGGCG TCGGACTCGA CTCTGGGGCC GACAGCGGGT CTAAACGCCG ATGGTAAACA CGATCATATT TGGGATACCG TTGTACCGAC CTTTATTCAC TATAACCTAC CCTTAATGGT ATTTGGCTGG ATTGCAGCGA TGAGTTTGTA A
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Protein sequence | MINPVVLSVC VMLALSLMRI NVVIALTLSA LIGGLSAGMS VSDTVSAFEG GLGGGATIAL SYAMLGAFAV AISKSGITDL LAQTVINKVH GRHPDHLTYV IKYVVLSLIL LITISSQNII PVHIAFIPIL IPPLISVFTK LRLDRRLVAC ILTFGLITPY MVLPIGFGGI FLNNILLKNL HDNGLEVTAS QVPTAMILPA LGMVTGLLIA VFISYRKPRD YPQGESLFTP AENQKPAKTP LNKRHIVVAL IAISATLSIQ LLSGSMIVGA LAGFVVFTFG GVIAWKETQD VFTKGVHMMA MIGFIMIAAA GFTAVMKATG SVDTLVEMLS ANIGQNKPLA AVLMLVVGLL VTMGIGSSFS TIPIIATIYV PLALSFGFSP MAIIALVGTA AALGDAGSPA SDSTLGPTAG LNADGKHDHI WDTVVPTFIH YNLPLMVFGW IAAMSL
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