Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0825 |
Symbol | |
ID | 4625467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1028524 |
End bp | 1030620 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639796025 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_942267 |
Protein GI | 119944587 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0159879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCCTA TTGTTAAAAG TTTTCAGTAT GGCGAACATA CTGTCACTCT AGAAACGGGC GTAATGGCTC GTCAGGCAAC TGCCGCTGTA ATGTGTAGTA TGGATGATAC CTGTGTATTC GTTTCTGTTG TTGGTAAAAA TGCTGACAAC CAAGAGCGTG ATTTCTTTCC GCTGACGGTA AACTACCAGG AAAAAACCTA TGCTGCGGGT AAAATCCCAG GTGGTTTCTT CAAACGTGAA GGCCGTCCAA GCGAAGACGA AACACTGATT GCACGCCTTA TTGACCGTCC AGTTCGTCCT CTATTCCCAG CCGGTTTCAA AAACGAAGTA CAAGTGATTG CAACTGTTGT CTCTATCAAC CCTGAAGTTA ACCCGGATGT CGTTGCAATG ATTGCAACAT CTGCGGCGCT TTCTATCTCG GGTATGCCTT TCAAGGGGCC TATCGGTTGT GCACGTGTTG GTTATAAAGA AGGTGAATAC CTGCTTAACC CAACCAAAAC TGAATTAGAA ACAAGTGATC TTAACCTTGT TGTATCTGGT ACAGATAACG CTGTCTTAAT GGTTGAATCT GAAGCCGGTA TTCTAAGCGA AGACGTTATG CTTGGTGCGG TTGTATTTGG TCACGATCAG CAACAAATTG TTGTTGAATC AATCAAAGAG TTCGCTGCAG AGGTTGCTCG TCCAGCATGG AACTGGGCTG CCCCTGCACG TAACGAAGCA TTAGATGCGG CTATTGCAAC TGAAGCACAA GCGCGTTTTG AACAAGCTTA CCAGATCAGT GATAAAGGCG ATCGTTACGA TGCGATTAAA GCTATCACCT CTGAAGTTAA AGAAAAATTA TTAGCATCTG ATGAAACATT AGAAGCTAAG CAAATCGGTG AATACTTACA CGATCTAGAA AAAACAGTGG TACGTACGCG CATTATTAAA GGTGAGCCGC GTATCGATGG TCGCGATCCT GAAAGTATTC GTGCATTAGA TGTCCGTACT GGCGTGTTAC CTCGTACTCA CGGTAGTGCA TTGTTTACCC GTGGTGAAAC TCAAGCATTA GTGACGGCGA CCCTTGGTAC TCAGCGTGAT GCGCAAATCA TTGACAGTAT AATGGGTGAG AAGAAAGATA ACTTCTTATT ACATTACAAC TTCCCTCCTT ATTGTGTAGG CGAAACTGGC TTTGTTGGCT CTCCTAAACG TCGTGAGATT GGCCATGGCC GTCTTGCTAA ACGTGGTGTT TTGGCTGTTA TGCCTTCGCT TGAAGAATTC CCATACACAG TACGTGTTGT GTCTGAAATC ACTGAATCAA ACGGTTCATC TTCAATGGCT TCTGTTTGTG GTGCATCGCT AGCATTAATG GATGCGGGTG TTCCTCTTAA AGCTTCTGTT GCGGGAATCG CGATGGGTCT TGTAAAAGAA GGCGAAGAGT TTGTTGTGCT TTCTGATATT CTAGGTGATG AAGATCATCT TGGTGATATG GACTTTAAAG TTGCCGGTAC TACCGAAGGT ATTACTGCAC TACAGATGGA TATCAAAATT GAAGGGATCA CGCGTGAAAT CATGCAGATT GCTTTAAATC AGGCAAAAGC TGCACGTTTG CACATTTTGA CCGTAATGGA CCAAGCACTT CCACAAGGTC GCGCTGATAT TTCTCAATTC GCTCCACGTA TTCATACTAT CAAAATCAAC ACTGATAAAA TCCGTGATGT TATTGGTAAA GGCGGCGCTG TTATCCGCTC TCTATGTGAA GAAACCGGTA CTACAATTGA AATCGAAGAT GACGGTACTG TTAAAATTGC AGCGACCTCT GGTGAGCAAG CTGATGACGC AATTAACCGT ATTAAAGCAC TCACAGCTGA AGTTGAAGTG GGTACTATCT ACACAGGTAA AGTGGTACGT TTAGCTGATT TCGGTGCCTT TGTTAATATC CTTCCCGGTA AAGATGGTCT AGTACATATC TCGCAAATCT GTGAAGAGCG TGTACAGAAA GTGTCTGATC ACCTTAAAGA AGGTCAGGAA GTGAAAGTTA AAGTATTAGA AGTTGATCGC CAGGGCCGTG TGCGCTTAAG CATCAAAGAA GCTGCTGAAA AAACAACAGC TGAATAA
|
Protein sequence | MTPIVKSFQY GEHTVTLETG VMARQATAAV MCSMDDTCVF VSVVGKNADN QERDFFPLTV NYQEKTYAAG KIPGGFFKRE GRPSEDETLI ARLIDRPVRP LFPAGFKNEV QVIATVVSIN PEVNPDVVAM IATSAALSIS GMPFKGPIGC ARVGYKEGEY LLNPTKTELE TSDLNLVVSG TDNAVLMVES EAGILSEDVM LGAVVFGHDQ QQIVVESIKE FAAEVARPAW NWAAPARNEA LDAAIATEAQ ARFEQAYQIS DKGDRYDAIK AITSEVKEKL LASDETLEAK QIGEYLHDLE KTVVRTRIIK GEPRIDGRDP ESIRALDVRT GVLPRTHGSA LFTRGETQAL VTATLGTQRD AQIIDSIMGE KKDNFLLHYN FPPYCVGETG FVGSPKRREI GHGRLAKRGV LAVMPSLEEF PYTVRVVSEI TESNGSSSMA SVCGASLALM DAGVPLKASV AGIAMGLVKE GEEFVVLSDI LGDEDHLGDM DFKVAGTTEG ITALQMDIKI EGITREIMQI ALNQAKAARL HILTVMDQAL PQGRADISQF APRIHTIKIN TDKIRDVIGK GGAVIRSLCE ETGTTIEIED DGTVKIAATS GEQADDAINR IKALTAEVEV GTIYTGKVVR LADFGAFVNI LPGKDGLVHI SQICEERVQK VSDHLKEGQE VKVKVLEVDR QGRVRLSIKE AAEKTTAE
|
| |