Gene Ping_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0822 
Symbol 
ID4625463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1026263 
End bp1027162 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content44% 
IMG OID639796022 
ProductABC transporter inner-membrane translocator 
Protein accessionYP_942264 
Protein GI119944584 
COG category[R] General function prediction only 
COG ID[COG4120] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0113178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTT ATGCTTTTTT AGGCACATTA GAAATAGGCC TTATCTATGG CTTAGTTGCT 
ATCGGGGTCT ATCTTACTTT TCGAATTTTA GATTTTCCAG ACCTTACGGT TGATGGTAGT
TTTACACTTG GCGCAGCTGT TGCAGCGACG TTAATTGTTG CAGGTCAAAA CCCATATTTA
GCAACCTTAT GCGGAACACT TGCGGCATCT TGTGCAGGTT TAGTTACCGC ATGGTTAAAT
CTGCGTTTTA ATATTCTGCA TTTGCTGGCC AGTATCCTGA CTATGACTGC CCTGTATACC
ATCAATTTAC GGGTGATGGG AAAACCTAAT GTTGCCTTAA TTATGGAGCC AACGGTCCTT
TCTCCTTTCG AAGGGATTTT GCCGGACATG TACATGAAGG TTATCTTTGT GGCTGTCTGC
GCTATTGTTG GCGGACTGTT GGTCGCCTGG TTTTTGCGTA CCCAATATGG TTTAGCGATG
CGTGCGGTCG GCTCTAATAA ACGCATGGCG CAAGCTAACG GTATCGTTGT GACTGAAAAA
GTTTATGTGG GTTTAGCACT CTCTAATGGT TTGGTCGGAC TTGCCGGTGC ACTGTTTGCA
CAAACCAATG GTTTTGCCGA TTCAACCATG GGAATAGGGA CTATAGTGGT TGGTTTAGCG
GCTGTTATTA TTGGTGAATC TCTGCTGGCG AGTCGTTCGA TGCTGGTCAT TGTAATGAGC
TGTATTGTGG GTTCCGTCTT ATATCGTTTT GCCGTATCAA TGGCATTAAA TGCTGACTTT
TTAGGTTTTC AAGCCTCAGA TTTAAACTTG ATTACCGCTG TATTGGTGGC TCTTGCATTA
GTGTTTCCTA AATTACGTAA TGAATGGAAA GCGAAACGCG CCATCAAGGA GCAAATATGA
 
Protein sequence
MSLYAFLGTL EIGLIYGLVA IGVYLTFRIL DFPDLTVDGS FTLGAAVAAT LIVAGQNPYL 
ATLCGTLAAS CAGLVTAWLN LRFNILHLLA SILTMTALYT INLRVMGKPN VALIMEPTVL
SPFEGILPDM YMKVIFVAVC AIVGGLLVAW FLRTQYGLAM RAVGSNKRMA QANGIVVTEK
VYVGLALSNG LVGLAGALFA QTNGFADSTM GIGTIVVGLA AVIIGESLLA SRSMLVIVMS
CIVGSVLYRF AVSMALNADF LGFQASDLNL ITAVLVALAL VFPKLRNEWK AKRAIKEQI