Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0806 |
Symbol | prfC |
ID | 4626379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1007231 |
End bp | 1008817 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796005 |
Product | peptide chain release factor 3 |
Protein accession | YP_942248 |
Protein GI | 119944568 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0794725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00323143 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAAGTA AAGACATTAT AGAGAATGTA GAGAAGAGAA GAACATTTGC GATCATCTCT CACCCCGATG CAGGTAAAAC AACGATCACT GAAAAAGTGT TATTATTTGG CAACGCATTA CAAAAAGCAG GGACCGTTAA GGGTAAAAAA TCGGGTCAGC ATGCAAAATC TGATTGGATG GAGATGGAGA AAGATCGTGG TATCTCTATC ACTACCTCGG TAATGCAGTT TCCCTATAAA GACAGATTAG TTAATTTATT AGATACTCCC GGACATGAAG ATTTCTCGGA AGATACTTAC CGTACTTTAA CGGCCGTTGA TTCCTGTTTA ATGGTGATTG ACGCTGCAAA AGGTGTTGAG CAACGTACTA TTAAATTAAT GGAAGTAACC CGTTTACGTG ATACGCCGAT TATCACCTTT ATGAATAAGT GCGATCGTGA AACACGGGAT CCGGTTGATT TAATGGATGA AGTTGAAGCT ATCTTAAATA TTGCCTGTGC ACCTATTACT TGGCCTATTG GAATGGGCAA AGAATTTAAA GGGATTTATG ATCTGTTACG TGATGAAGTG ATACTTTATT CATCGGGTCA GGGGCATACC ATTCAAGAGG TGCGTATTAT TAAAGGGCTG GATAATCCAG AGCTTGAAAG TGTGCTGCCT AACCATATTC ATGATCTGCG TGAAGAGTTA GAATTGGTTG TTGGTGCCTC GCATCAATTT GATCATGAGC TGTTTTTAAA AGGTCAATTA ACACCGGTTT ATTTTGGTAC TGCACTGGGC AACTTTGGTG TTGATCATGT TCTGGATGGC CTGGTTGAGT GGGCACCAAA ACCCTTATCC CGCGCCGCAA AACAACGTGT TGTTGAGCCC CTTGAAGATG TTTTTTCCGG ATTTATTTTT AAAATCCAAG CAAATATGGA TCCTAGACAT CGTGATAGGA TTGCCTTTAT GCGTGTTTGT GCAGGGAAAT ATGAAAAAGG CATGAAAATG CATCATGTCC GTACGGGTAA AATGGTCAGT ATTTCCGATG CGGTTACCTT TATGGCGGGT GACAGAACCG CCACCGAAGA GGCGTATCCC GGTGATATTA TCGGGTTACA CAACCACGGT ACTATTCAAA TTGGTGATAC ATTTACTAGT GGCGAAACGC TTAAATTCGC CGGTATTCCT AATTTCGCAC CGGAAATGTT CCGCCGTATT CGTTTGCTTG ATCCGCTTAA ACAAAAACAG CTGTTGAAAG GTTTAATGCA ACTCTCTGAA GAGGGGGCAG TACAAGTTTT CAGACCGCTG CGCAGTAATG ATTTAATCGT TGGTGCGGTC GGTGTGCTTC AATTTGAAGT GGTTGTACAG CGTTTAAAAT CGGAATACAA AGTGGATGCT ATTTATGAGG CGATCAGTGT TGCAACGGCT CTCTGGGTTG AAAGTGATAA CCCGTTAAAA ATGGCCGAAT TTGAGAAAAA AGCTTACGAT AATTTAGCCT TAGACGGCAG TAATAACCTG GCCTACATTG CACCGACTAT GGTCAATCTA AATCTTGCTA TGGAGCGCTA TCCGGATATT CGCTTTAGAA AAACCCGCGA GCATTAA
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Protein sequence | MTSKDIIENV EKRRTFAIIS HPDAGKTTIT EKVLLFGNAL QKAGTVKGKK SGQHAKSDWM EMEKDRGISI TTSVMQFPYK DRLVNLLDTP GHEDFSEDTY RTLTAVDSCL MVIDAAKGVE QRTIKLMEVT RLRDTPIITF MNKCDRETRD PVDLMDEVEA ILNIACAPIT WPIGMGKEFK GIYDLLRDEV ILYSSGQGHT IQEVRIIKGL DNPELESVLP NHIHDLREEL ELVVGASHQF DHELFLKGQL TPVYFGTALG NFGVDHVLDG LVEWAPKPLS RAAKQRVVEP LEDVFSGFIF KIQANMDPRH RDRIAFMRVC AGKYEKGMKM HHVRTGKMVS ISDAVTFMAG DRTATEEAYP GDIIGLHNHG TIQIGDTFTS GETLKFAGIP NFAPEMFRRI RLLDPLKQKQ LLKGLMQLSE EGAVQVFRPL RSNDLIVGAV GVLQFEVVVQ RLKSEYKVDA IYEAISVATA LWVESDNPLK MAEFEKKAYD NLALDGSNNL AYIAPTMVNL NLAMERYPDI RFRKTREH
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