| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0749 |
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| Symbol | |
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| ID | 4623667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 944542 |
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| End bp | 945174 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639795953 |
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| Product | NADH:ubiquinone oxidoreductase, subunit D |
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| Protein accession | YP_942200 |
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| Protein GI | 119944520 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00151282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAAT CTAATGAAAT AAAAGCGGTT TTAACCTCGC CAATAATAAG CAATAACCCG
ATTACCTTAC AGATTTTAGG GATTTGCTCC GCATTAGCCG TAACAAGTAA ATTAGAAAAC
GCCGTTGTAA TGACGGTTGC CGTGCTTTTT GTAACTGCAT TTTCTAACTT TTTTATCTCT
ACTATTCGTA ATTACATTCC CAATAGTGTC CGCATTATTG TACAGATGGC TATTATTGCG
TCTTTGGTAA TTGTTGTTGA CCAATTCTTG AGAGCATACG CATTTTCGAT CTCTAAGCAA
TTATCAGTAT ATGTTGGTTT AATTATCACT AACTGTATTG TAATGGGTCG AGCAGAAGCG
TTTGCGATGA AGAATAAACC CATCGCAAGC TTTATGGATG GCGTCGGAAA TGGGCTAGGT
TATGGCGTGA TTCTTATTCT CGTTGGCGCT TTCCGTGAGT TGTTTGGTTC CGGTTCTTTA
TATGGTTTCG TCATTTTACC CTTAACGTCG AATGGCGGTT GGTATCAAAG TAATGGTTTA
TTGCTACTAG CACCCAGTGC TTTCTTTATT GTTGGTGGAA TTATCTGGGC TGTCCGGACG
ATGAGACCAG ACCAAGTTGA GCCTAAGGAG TAA
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| Protein sequence | MAKSNEIKAV LTSPIISNNP ITLQILGICS ALAVTSKLEN AVVMTVAVLF VTAFSNFFIS
TIRNYIPNSV RIIVQMAIIA SLVIVVDQFL RAYAFSISKQ LSVYVGLIIT NCIVMGRAEA
FAMKNKPIAS FMDGVGNGLG YGVILILVGA FRELFGSGSL YGFVILPLTS NGGWYQSNGL
LLLAPSAFFI VGGIIWAVRT MRPDQVEPKE
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