| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0710 |
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| Symbol | |
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| ID | 4625057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 902790 |
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| End bp | 904163 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639795909 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_942161 |
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| Protein GI | 119944481 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATGT TAACCCTTTT TCTAATGGTG ATTGTATTTA TGACGGTCGG TGTGCCTATT
GCGGTTTCAC TGGGTCTGTC GAGTATGATC TTTTTATTAA TACATTCTGA TGCGTCCTTA
GCGTCAGTTG CGCAAACACT GTTTAACGCG TTTGCCGGAC ATTATACTTT ATTGGCTATC
CCTTTCTTTG TATTAGCGTC CAGTTTTATG GCAACGGGTG GCGTCGCTAA GCGGATTATA
CGTTTTGCAA TCGCAATAGT GGGCTCACTG CGTGGTGGTC TGGCAATGGC CTCGGTGGTT
GCCTGTATGA TGTTTGCTGC ACTGTCGGGA TCGTCTCCGG CAACCGTTGT TGCAATTGGC
GGGATCGTGA TTGCTGGAAT GGTTAAAAAT GGTTACAGCA AAGATTTTGC GGCAGGTGTT
ATCTGTAATG CCGGCACCTT AGGGATTTTG ATTCCGCCCT CGATCGTGAT GGTGGTTTAT
GCGGCGGCGA CGGATGTGTC TGTCGGGCGA ATGTTCTTAG GTGGCGTCAT ACCGGGTTTG
CTCGCGGGTT TAATGCTGAT GATTGCTATC TATATTTATG CGCGGATTAA GAATATTCCG
GCTCAGCCTT TTGTTGGCTG GAAAGAGGTT TTTGATTCGG CTAAAGAGGC GGGTTGGGGA
TTACTGCTGA TTGTTATTAT TCTTGGCGGG ATTTATGGCG GTATCTTTAC ACCGACCGAG
GCCGCGGCTG TAGCGGCAGT TTATGCCTTT TTTATCTCTA ATTTTATCTA TAAAGATATG
GGGCCTTTAT CCGATAAAGA GTCTGAAGAT AAACGGGCTA AAGCGTACTG GCGTAAAGCG
TCACGTGTAT TTTTTCATGA AGATACCCGT AAAACCCTTT ATGAAGCGGG AAAATTAACA
ATTATGTTAA TGTTTATTGT TGCCAATGCA TTGATTTTAA AACATGTTTT AACTGAAGAG
CAGATTCCGC AAATGATCAC CGCATCAATG CTGGATGCCG GTCTAGGACC TATTACTTTC
CTGATTGTGG TTAATATCAT CTTATTAATC GGTGGACAAT TTATGGAGCC CTCCGGCCTG
CTTATTATCG TTGCGCCTTT GGTCTTTCCG ATAGCCACAT CATTGGGAAT TGATCCTATT
CACCTCGGTA TTATGATGGT GGTGAATATG GAGATAGGCA TGATCACCCC GCCCGTGGGA
CTGAATCTGT TTGTGACCGC AGGTGTCGCA CAGATGTCGA TGATGAGGGT CGTGAAAGCC
GCGTTACCGC TGGTCGGTGT TATGTTCCTG TTTTTGATGA TAGTCACTTA TGTGCCATGG
GTTTCAACCT GGTTACCCAC CCTGATGATG GGACCTGAAA TCATTACTCA CTAA
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| Protein sequence | MAMLTLFLMV IVFMTVGVPI AVSLGLSSMI FLLIHSDASL ASVAQTLFNA FAGHYTLLAI
PFFVLASSFM ATGGVAKRII RFAIAIVGSL RGGLAMASVV ACMMFAALSG SSPATVVAIG
GIVIAGMVKN GYSKDFAAGV ICNAGTLGIL IPPSIVMVVY AAATDVSVGR MFLGGVIPGL
LAGLMLMIAI YIYARIKNIP AQPFVGWKEV FDSAKEAGWG LLLIVIILGG IYGGIFTPTE
AAAVAAVYAF FISNFIYKDM GPLSDKESED KRAKAYWRKA SRVFFHEDTR KTLYEAGKLT
IMLMFIVANA LILKHVLTEE QIPQMITASM LDAGLGPITF LIVVNIILLI GGQFMEPSGL
LIIVAPLVFP IATSLGIDPI HLGIMMVVNM EIGMITPPVG LNLFVTAGVA QMSMMRVVKA
ALPLVGVMFL FLMIVTYVPW VSTWLPTLMM GPEIITH
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