Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0708 |
Symbol | |
ID | 4627039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 901049 |
End bp | 902047 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639795907 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_942159 |
Protein GI | 119944479 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAA AATTAATGAC CCTTTCCCTT GGCACCGTTG CTGTACTTGC AAGCTTTAAT GCATCAGCAA GTTGCGAGCC GGGTGAAATA GTGATCAAAT TCAGCCATGT AACCAATGAG ACCAGCCACC CTAAGGGCAT CGCCGCTTCT TTATTATCTG AGCGAGTGAA TAAAGAGATG GATGGCAAGG CTTGTATGGA AGTTTTTCCT AATACCACGC TTTATAATGA TGACCAGGCC TTAGAAGCTA TTTTAAGCGG TGATCTGCAG ATGGCTGCTC CTTCTTTATC TAAGTTTGAG AAAATAACTA AAAAATTCCG CATTTTTGAT CTTCCCTTTT TATTCGCTGA CGTGGCCGCC GTAGACCGTT TTCAAAATTC AGCATCCGGT GATATTTTGA AAGATTCGAT GGTCCGTCGA GGAATCAAAG GATTGGCATT TTGGCACAAT GGCATGAAAC AGATGTCAGC GAGCAAACCT TTGTTATTGC CAAGTGATGC TGAAGGTCTT AAGTTCCGAG TCCAAGCATC CGATGTGCTT GTTGCTCAAT TTGAACAACT TGGCGCCAAC CCCCAAAAAA TGTCTTTCAG TGAAGTTTAT GGTGGCCTGC AAACCAAAGT TATCGATGGT CAGGAAAATA CCTGGTCAAA TACCTACGGC AAAAAATTCT TCGAAGTACA AGATGGTGTG ACCGAAACGA ATCACGGTAT TCTGGATTAC CTGGTTGTGA CATCTGATGA TTGGTGGAAG GGTTTACCAA CAGATGTACG TGAGCAGTTA GGCACAATAA TGTCTGAAGT GACTCAAACT AGAAATGGTG AGTCAATGAG AGTTAATGAA GAAAATAAAC AAAAAATTAT TGATGCCGGT GGCGTGGTGC GCACTTTAAC AGCTGAGCAG CGTCAAGCCT GGGTTGACGC ACTGAAACCT GTCTGGAAAA AATTCGAAAA AGATATTGGT AGTGATCTTC TTGAAGCTGC AATAGCATCA AATAAATAA
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Protein sequence | MLKKLMTLSL GTVAVLASFN ASASCEPGEI VIKFSHVTNE TSHPKGIAAS LLSERVNKEM DGKACMEVFP NTTLYNDDQA LEAILSGDLQ MAAPSLSKFE KITKKFRIFD LPFLFADVAA VDRFQNSASG DILKDSMVRR GIKGLAFWHN GMKQMSASKP LLLPSDAEGL KFRVQASDVL VAQFEQLGAN PQKMSFSEVY GGLQTKVIDG QENTWSNTYG KKFFEVQDGV TETNHGILDY LVVTSDDWWK GLPTDVREQL GTIMSEVTQT RNGESMRVNE ENKQKIIDAG GVVRTLTAEQ RQAWVDALKP VWKKFEKDIG SDLLEAAIAS NK
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