Gene Ping_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0687 
Symbol 
ID4626484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp873915 
End bp875390 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content44% 
IMG OID639795887 
Productthiol oxidoreductase containing 2 cytochrome c heme-binding sites 
Protein accessionYP_942139 
Protein GI119944459 
COG category[C] Energy production and conversion 
COG ID[COG3488] Predicted thiol oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACA AAAATATTTT TCCTTTATCA GTGCTGCTTT CCTGTCTTTC CTGTAATAGT 
TTAGCGCTGG ATAAAAATCA GCATCTAGCG GGCGGTACAG CCAGCGTGGA CAACAAAATG
GCCTCAGCCT TTTCAATGCA TTCAGCGAAT ATGACCAAAG CCAAAAATAT TTTAAGCTTT
AACGGCGGCA ATAAATTTTT TGAAGAGCCC TGGGCACAAA GTGTTGGTTC CGTAAGCTCT
CAAGATGGGT TAGGTCCCCT TTTTAACAGT AATGCCTGTC AAAATTGTCA TGTACGTGAT
GGCCGGGGAC ATGCATCGGA AGCTGCAAAG GGGCAATTGG GGAATGATTT TTCTACCCTG
TTAATTCGCG CCTCCAAGAG TGAGCTAACA ACAGCGCAAA CAGCACGTAT CAAACAATCA
TTGCAAGCGA ATGTTGGTGA TGCCTGTATT GGTGGACAAC TGCAGCACAA AGCTGTGTTT
GGTGTTACAA ATGAAGCTAA TCAACAACTG AGTTATCGTT ATAAGACGGT TAATTTTGCC
GATGGGAAAA CTATTGAGCT GCGCAGTCCA ATTTGGCATG TTAAGGGTAT TAGCTGCGAT
ATTGGGCAAG ATACTGTTCT TTCTGCGCGC GTTGCACCCG CAATGATTGG TCTGGGTTTA
CTGGCGCTGA TTGATAAGCA AGATATTTTA GCCAGGCAGG ATATTGATGA TGCCAATCAA
GATGGTATCT CCGGTAAAGC CAATCAAGTT TGGTCAATCG CGGCGCAGGG TGTCACCTTA
GGCCGTTTTG GCTGGAAAGC GGGACAGCCA AGCTTAAGGC AGCAGGCAGC AGGCGCTTTT
TTAGGCGATA TGGGGATTAC TAGTGATTTA GCTACCAATG AAAACTGTTT AAGCACGCAA
TCCGATTGTC TTAATGCAAA AAATGGTAAT AGTCATCATA ACAATACACC GGAAGAATTT
GAAGTGTCAA CGCGGATCCT CGACAAGGTC ACTTTTTATG CTCATCATCT CGCCGTCCCG
ATACGCCGCA ACGCCTATGC ACCAAAAGTT TTACAGGGTA AACAACTTTT TAATAAAATA
GGTTGTGGAC AATGCCATAG CGAAAGCTAT ACAACCCAAA AGAGTGAGCA GTTTAGTGAA
CTCTCCGAGC AAAAAATTTA TCCCTACAGC GATCTGTTAT TACATGATAT GGGGACAGGG
TTAACTGATT TTGATCAACA CAGTAATGCC GTCGACGGTG AAATACCGGT TGAGTTTTTA
GCGCAGGCAA ATGAATGGCG AACCCCTCCT CTATGGGGAA TTGGTTTGGC ACAGACAGTT
GATCCTAAAG CTACTTTTTT ACATGATGGT CGCGCCAGAA CCATTTTGGA AGCAGTTCTC
TGGCACAGTG GTGAAGCGCA GACAAGTAAA TTGGCCCTAT TGAAACTGGA TAAGGTCGAG
CGTCAGGCAC TGCTTGCTTT TTTGCACGAC TTATAA
 
Protein sequence
MINKNIFPLS VLLSCLSCNS LALDKNQHLA GGTASVDNKM ASAFSMHSAN MTKAKNILSF 
NGGNKFFEEP WAQSVGSVSS QDGLGPLFNS NACQNCHVRD GRGHASEAAK GQLGNDFSTL
LIRASKSELT TAQTARIKQS LQANVGDACI GGQLQHKAVF GVTNEANQQL SYRYKTVNFA
DGKTIELRSP IWHVKGISCD IGQDTVLSAR VAPAMIGLGL LALIDKQDIL ARQDIDDANQ
DGISGKANQV WSIAAQGVTL GRFGWKAGQP SLRQQAAGAF LGDMGITSDL ATNENCLSTQ
SDCLNAKNGN SHHNNTPEEF EVSTRILDKV TFYAHHLAVP IRRNAYAPKV LQGKQLFNKI
GCGQCHSESY TTQKSEQFSE LSEQKIYPYS DLLLHDMGTG LTDFDQHSNA VDGEIPVEFL
AQANEWRTPP LWGIGLAQTV DPKATFLHDG RARTILEAVL WHSGEAQTSK LALLKLDKVE
RQALLAFLHD L