Gene Ping_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0642 
Symbol 
ID4626840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp827144 
End bp827845 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content41% 
IMG OID639795842 
ProductDNA repair protein RecO 
Protein accessionYP_942094 
Protein GI119944414 
COG category[L] Replication, recombination and repair 
COG ID[COG1381] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00613] DNA repair protein RecO 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.272971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATTG AGTGCCACAA TGCTTTTATT TTACATCGAC GTCCTTATCG GGAAACCAGT 
CAGTTAATTG ATCTTTTCTG TCAGGACGTT GGTAAAGTAA GCCTGGTTTA TAAAGGTGGG
CGCAGTAGTA CGCGTATGAG ACGTGGTACG GCGCAACCTT TTACTCTATT GCAAGTCAGT
TATTTTGGCC GCGGCAGTTT AAAAACAGTT AAATCCTTTG AAGCGCAAAC CCAAGTTGTC
CCATTAGTCG GGCAGCGACT TTTTCTGGCG ATGTATATCA ACGAATTATT GTATCGTTTA
TTGCAGGCAG AAACGGCCTG CGATGGTTTA TTTGAGTGTT ATCAGCAAAC CTTATTAGCT
ATTGCCGGCG CTGTGGATCC GCAAATAGCA TTGCGTCTTT TTGAGTTGAC ACTGATTGAA
ACCTTAGGTT ACGGGGTTAA TTTTAGCGAA GATATTTATA GCGGTGAATT AATTGAAAGC
GGTTACGAAT ATCAATATCA GCATCAAGCA GGTTTTTTTG CTAAACAAGC TATTCATAAA
CAGCATGACG TTTACAGTGG GCAGGATATA CTTGCATTAG CACAACGTGA TTTTTCAAAT
CAAAATGTCT TAAAATCAGC AAAACGATTT TGCCGGCAAG CATTAGCTAA TCTCTTAGGT
GGCAAACCAT TACATAGTCG GGCACTCTTT ACGGCTAAAT AA
 
Protein sequence
MSIECHNAFI LHRRPYRETS QLIDLFCQDV GKVSLVYKGG RSSTRMRRGT AQPFTLLQVS 
YFGRGSLKTV KSFEAQTQVV PLVGQRLFLA MYINELLYRL LQAETACDGL FECYQQTLLA
IAGAVDPQIA LRLFELTLIE TLGYGVNFSE DIYSGELIES GYEYQYQHQA GFFAKQAIHK
QHDVYSGQDI LALAQRDFSN QNVLKSAKRF CRQALANLLG GKPLHSRALF TAK