Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0642 |
Symbol | |
ID | 4626840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 827144 |
End bp | 827845 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639795842 |
Product | DNA repair protein RecO |
Protein accession | YP_942094 |
Protein GI | 119944414 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.272971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATTG AGTGCCACAA TGCTTTTATT TTACATCGAC GTCCTTATCG GGAAACCAGT CAGTTAATTG ATCTTTTCTG TCAGGACGTT GGTAAAGTAA GCCTGGTTTA TAAAGGTGGG CGCAGTAGTA CGCGTATGAG ACGTGGTACG GCGCAACCTT TTACTCTATT GCAAGTCAGT TATTTTGGCC GCGGCAGTTT AAAAACAGTT AAATCCTTTG AAGCGCAAAC CCAAGTTGTC CCATTAGTCG GGCAGCGACT TTTTCTGGCG ATGTATATCA ACGAATTATT GTATCGTTTA TTGCAGGCAG AAACGGCCTG CGATGGTTTA TTTGAGTGTT ATCAGCAAAC CTTATTAGCT ATTGCCGGCG CTGTGGATCC GCAAATAGCA TTGCGTCTTT TTGAGTTGAC ACTGATTGAA ACCTTAGGTT ACGGGGTTAA TTTTAGCGAA GATATTTATA GCGGTGAATT AATTGAAAGC GGTTACGAAT ATCAATATCA GCATCAAGCA GGTTTTTTTG CTAAACAAGC TATTCATAAA CAGCATGACG TTTACAGTGG GCAGGATATA CTTGCATTAG CACAACGTGA TTTTTCAAAT CAAAATGTCT TAAAATCAGC AAAACGATTT TGCCGGCAAG CATTAGCTAA TCTCTTAGGT GGCAAACCAT TACATAGTCG GGCACTCTTT ACGGCTAAAT AA
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Protein sequence | MSIECHNAFI LHRRPYRETS QLIDLFCQDV GKVSLVYKGG RSSTRMRRGT AQPFTLLQVS YFGRGSLKTV KSFEAQTQVV PLVGQRLFLA MYINELLYRL LQAETACDGL FECYQQTLLA IAGAVDPQIA LRLFELTLIE TLGYGVNFSE DIYSGELIES GYEYQYQHQA GFFAKQAIHK QHDVYSGQDI LALAQRDFSN QNVLKSAKRF CRQALANLLG GKPLHSRALF TAK
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