Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0539 |
Symbol | dctQ-2 |
ID | 4623726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 689415 |
End bp | 690038 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639795735 |
Product | tripartite ATP-independent periplasmic (TRAP) C4-dicarboxylate transporter subunit DctQ |
Protein accession | YP_941992 |
Protein GI | 119944312 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTG GATTTTTTAC CCGATTAGGG GAAATAACTG ACTATATGGA AGAGACGCTC ATTGCGCTCT TTTTAGGTTT AATGACCCTG TTAACCTTTG CCAATGTCGT TGTCCGATAT ATTTTCAACG ATAATATTTT ATGGGCATTG GAGCTGACCG TGTTTATGTT TGCCTGGATG GTGCTGGTCG GTGCCTCTTA TCTGGTGAAA AAACATTTTC ATATCGGGGT CGACGTGATT ATTAATCTTG CGCCTGCAGG GCTTAAAAAA GTCTTTGCAT TAATCGCCGT TGCTTCATGC TTAACGTTTT CAATTTTATT ATTAATTGGT TCTTGGGACT ACTGGCTCCC TTTTATAACG GACCAGGCCT GGTATGAAAC TCAGGATATT CCAATGCCAG ATTTCTTACA ATTTTTATCT GGCTGGTTCA ATGAAGGAGA ACGATATGAA AAATTACCCC GTTTTATCCC CTATTTTGCG CTGCCGCTGA GCATGGCAAT GATGACCTAT CGATTTCTGC AAATTGCCTG GCTGGTTGCC ACCAACAAAA TAGATAAGAT GATTGCAAGT CATGAAGCCG AAGAAGATTT AGATTCGTTA CACAATTCAG AGAAAGGAGA ATAA
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Protein sequence | MKRGFFTRLG EITDYMEETL IALFLGLMTL LTFANVVVRY IFNDNILWAL ELTVFMFAWM VLVGASYLVK KHFHIGVDVI INLAPAGLKK VFALIAVASC LTFSILLLIG SWDYWLPFIT DQAWYETQDI PMPDFLQFLS GWFNEGERYE KLPRFIPYFA LPLSMAMMTY RFLQIAWLVA TNKIDKMIAS HEAEEDLDSL HNSEKGE
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