Gene Ping_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0533 
Symbol 
ID4624845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp681616 
End bp682092 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content41% 
IMG OID639795729 
Producthypothetical protein 
Protein accessionYP_941986 
Protein GI119944306 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.942887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTAT ATGTCGATTT ACAAATTGCC TGCTCTGATC CTAATGACCT CCCAATGCCG 
GCATCCTTTG AGAAATGGAT TGAAGCGGCT ATATTAGGTG GTTCAGAAAG TCATCGGGAA
GAAGCGGAAT TAACGGTCCG TATTGTTGAT CAAGATGAAA TTATGCAGCT AAACCACCAA
TATCGAAATA TAAGCAAAAC CACTAATGTA CTCGCTTTTC CTTTTCAAAA TCCCCCTGGG
CTTACCTTGC CATTACTCGG TGATCTGATT ATCTGCAAAG AGGTGGTGGA AAGTGAGGCA
AAACTGCAGG GCAAATCCTT AACTGCACAT TGGGCTCATA TGTCTATTCA TAGTACCCTG
CATCTGCTGG GTTATGATCA TATTGAGCAA GCCGAAGCAG TTGAAATGGA AAGTTTAGAG
ACAAAACTGT TAACCGAACT TGGTTTTACA GACCCTTACT TAAGTGAAAA AGAGTAA
 
Protein sequence
MQLYVDLQIA CSDPNDLPMP ASFEKWIEAA ILGGSESHRE EAELTVRIVD QDEIMQLNHQ 
YRNISKTTNV LAFPFQNPPG LTLPLLGDLI ICKEVVESEA KLQGKSLTAH WAHMSIHSTL
HLLGYDHIEQ AEAVEMESLE TKLLTELGFT DPYLSEKE