| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0480 |
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| Symbol | |
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| ID | 4626860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 606886 |
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| End bp | 608574 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639795673 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_941936 |
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| Protein GI | 119944256 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.942114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.860525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA ATAATATTAG TGGTCTGGCA TCCAGTCTTG CCACACGTGG TTTACTCCCC
TTTGATAAAC TTCAGCAGAT TACCAGCGCG GCACAGCAGG ATAAAAAATC CCTGGTAAGT
TATCTGGTCG ACAACAAATT TATCGATAGC CTGACGCTGG CGGAGTTCTT CGAAATAGAA
TATGGTCTTC CGTTATTAGA TGCATCTATC CTTGATCTGG ATGAAATACC GGAAAAATTT
CTGAATAACA AGTTGATAGA AAAACACCAT GCACTGCCGG TTTATGTGCA GGACAAAACC
CTGTATATCG CCATGTCTGA CCCCACTAAT ATTGCTGCGC TTGAAGACTT TGCTTTCAGC
TTTGCTATCC ATACCGATGC CCTGCTAGTG GAAGAGCAAT ACCTTGCTAA AGCCATTGAA
ACCGTATTGG AAGATGATGT TGCTTCTTTG GGTGAAATGT CCGATATTGA GGATATTGAG
GTTGATGATT CTGATTCGCG TCTGGATGAG GCGCAGGGTA ACGGCAGTGA TGATGCGCCT
ATTGTTAAAT ATATTAACAG CATTTTATTG GATGCGGTGC GCAAAGGGGC ATCGGATCTG
CACTTTGAAC CCTATGAAAA AACCTATCGT ATTCGCTTTC GTGTTGACGG AATTTTACAT
CAAGTGGCCA CGCCACCGGT GAATCTGGCC AACCGTTTTT CAGCCCGCCT TAAGGTTATG
TCAAAACTGG ATATCGCCGA GCGTCGTTTG CCGCAGGACG GGCGTATTAA ACTTAAAATT
ACCAATAAAC GCAGTGTGGA TTTGCGTGTC AGTACACTGC CGACCATGTG GGGCGAAAAG
GTGGTAATGC GTATTCTGGA CTCATCGGGA GCGAACCTGA ATATCGACAG TTTAGGCTAC
AATGATAAGC AGAAAGAAAG CTACCTTAGT GCTCTGGCAA AACCGCAGGG AATGATTTTA
ATCACTGGTC CGACTGGCAG TGGTAAAACT GTTTCTTTGT ATAGCGGATT AAATATTCTT
AATACCGTGC AGCGTAATAT TTCTACGGCG GAAGATCCGG TAGAGATTAA TTTATCCGGT
ATTAATCAGG TGCAGATCAA TACCAAAGCG GGATTAACCT TTGCCTCTGC ATTGCGTTCT
TTTCTACGTC AAGATCCCGA TATTTTGATG GTTGGTGAAA TTCGTGATTT AGAAACCGCT
GAAATTGCGA TCAAAGCCGC GCAAACCGGA CATATGGTTT TGTCTACCCT GCATACCAAC
TCCGCTGCGG AAACCTTAAC GCGTTTACTT AATATGGGTG TGCCCGCATT TAATGTCGCT
TCTTCGGTGT CGCTGATTAT CGCGCAGCGT TTGGCGCGGC GTTTATGCCC TGAGTGTAAA
ACCGAAGAGG TTTTTGAAAC GCCGGAATTA AAAACCATTG GGTTTACAGA AACCCAGATA
GCTGCGGGTA TCACGCTCTA TAAACCCGTT GGTTGTTCAA AATGTACTGA AGGTTATAAA
GGCCGAGTGG GTATCTACGA AGTGATGCAG ATGAGCGAGA CGATTGGTCA CCTTATTTTA
AACAATGGTA ATGCTCCGGA GATCGCCAAG CTGGCCGAGG CCGAGGGGAT GGATACACTG
CGTCAGTCAG CACTGCAGCA GGTGTTAAAG GGGATCACCA GTTTAACGGA AGTGACCCGG
GTAACCTAA
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| Protein sequence | MATNNISGLA SSLATRGLLP FDKLQQITSA AQQDKKSLVS YLVDNKFIDS LTLAEFFEIE
YGLPLLDASI LDLDEIPEKF LNNKLIEKHH ALPVYVQDKT LYIAMSDPTN IAALEDFAFS
FAIHTDALLV EEQYLAKAIE TVLEDDVASL GEMSDIEDIE VDDSDSRLDE AQGNGSDDAP
IVKYINSILL DAVRKGASDL HFEPYEKTYR IRFRVDGILH QVATPPVNLA NRFSARLKVM
SKLDIAERRL PQDGRIKLKI TNKRSVDLRV STLPTMWGEK VVMRILDSSG ANLNIDSLGY
NDKQKESYLS ALAKPQGMIL ITGPTGSGKT VSLYSGLNIL NTVQRNISTA EDPVEINLSG
INQVQINTKA GLTFASALRS FLRQDPDILM VGEIRDLETA EIAIKAAQTG HMVLSTLHTN
SAAETLTRLL NMGVPAFNVA SSVSLIIAQR LARRLCPECK TEEVFETPEL KTIGFTETQI
AAGITLYKPV GCSKCTEGYK GRVGIYEVMQ MSETIGHLIL NNGNAPEIAK LAEAEGMDTL
RQSALQQVLK GITSLTEVTR VT
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