Gene Ping_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0426 
Symbol 
ID4625439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp539175 
End bp539927 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content36% 
IMG OID639795622 
Productputative polysaccharide biosynthesis protein 
Protein accessionYP_941885 
Protein GI119944205 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0617021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTA TGCCTTTAGA AAAACAGATC ACTGAGAGAA ATCATAACGC ACTGAATATC 
TCCGATGATA GTCGAAAACA AATTCGAGAA ATGAATGATG ACTGGTTATT AACGTCCGAT
GAACTTGACG CATTAAAAAT AATTTATCCC GGTTGCGGGG ATGAAAAATC ACTCAATAAT
TATCGTGAAT TACGCACTAA AATATTAAAA AAGGCTAATA ACAAAAATTT TGTCTGCATG
CTTTCTAGCA CTAACCAAGG CTCGGGTACA ACGCATGTTG CTGTGAATTT AGCCGCTAGT
ATTGCCTTGG ATCATAGAAA AACGGCATTA ATTATTGATT GCAATAATTA CACTCCTAGT
TTAGATAACT ACCTTAAAGA AAAACCAAAA TTTGGTTTGT CTAATTTTCT TGAGGAAGAT
ACCCAGGAAA TAGAGGATAT TATCTATCCA TCAGGCATCC GGCGGATAAG AATTATTCCA
GCTGGATCTA AAACTGAACA CGCAGCAGAA AACTTTTCAT CAGAGAAGAT GGAAAAATTC
ATAGAGATGG CCAAAAAACG CTATCCAGAT CGTTTTATTA TTCTCGATAC GCCCCCTATT
GGATATTATG CTGAAAGCCA GATTTTAGCG TCAATTTGCG ATATGGCTAT TTTAGTAGTG
CGCTATGGGC AGACAAGTGA ATCACAAATT CAGACAGGCA TTGAGCTAAT TAGTAACGAT
AAACTTGCAG GCATTATTCT TAACAATAAA TGA
 
Protein sequence
MTVMPLEKQI TERNHNALNI SDDSRKQIRE MNDDWLLTSD ELDALKIIYP GCGDEKSLNN 
YRELRTKILK KANNKNFVCM LSSTNQGSGT THVAVNLAAS IALDHRKTAL IIDCNNYTPS
LDNYLKEKPK FGLSNFLEED TQEIEDIIYP SGIRRIRIIP AGSKTEHAAE NFSSEKMEKF
IEMAKKRYPD RFIILDTPPI GYYAESQILA SICDMAILVV RYGQTSESQI QTGIELISND
KLAGIILNNK