Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0398 |
Symbol | |
ID | 4624298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 506338 |
End bp | 506892 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639795594 |
Product | RDD domain-containing protein |
Protein accession | YP_941858 |
Protein GI | 119944178 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.173398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAAAC ATAACCACAA TAATGAACAG ATAAAAATTC TGCAACAACA GTATCAAAGT TGCCCGCGCG CTAATTTTTT AAAACGAACA GGCGCCTATA TCTACGACTT GTTTGCTGTT TCAGCTTTGC TAATGTTAGC CGGAATACTT GCGATTATAG TCGTGATTAT CGCAAGTAAC ACCGGCCTAA TAAATATTGA TGCTTATCAA GATGTTGCCG ATTTTCTCGC TTCCAGCCAA CTATTTGCAT TATATCTGGC AATCATCATC ATTGGCTTTT ACAGTTATTT CTGGACCCGA GGCGGTCAAA CTATAGGTAT GAAAGCGTGG CGATTACGTG TTCAAAATAG CGATGGTAGC AATATTTCCT TTACTCAATC ATTAATTCGT ATGGCAACGT CAGCCTTTGG CTTAGGCAAT TTTTTGGTTT TTTTTGGGAA TAAAAGTGCC TTTCAAGATC AGTGGGCAGA ATGTGAGATG GTCGTATTAA CAAAAGAGTT AAGCGATTGG AAAGGTTTTA AGGGCATGGG ATTTATGGAT CAGGATAAAA AATAA
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Protein sequence | MVKHNHNNEQ IKILQQQYQS CPRANFLKRT GAYIYDLFAV SALLMLAGIL AIIVVIIASN TGLINIDAYQ DVADFLASSQ LFALYLAIII IGFYSYFWTR GGQTIGMKAW RLRVQNSDGS NISFTQSLIR MATSAFGLGN FLVFFGNKSA FQDQWAECEM VVLTKELSDW KGFKGMGFMD QDKK
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