Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0339 |
Symbol | |
ID | 4626716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 439294 |
End bp | 441297 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639795537 |
Product | transketolase |
Protein accession | YP_941804 |
Protein GI | 119944124 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACCTC GTAAAGAGCT AGCTAACGCG ATTCGTGCAC TCAGTATGGA TGCCGTACAA AAAGCCAATT CAGGTCACCC TGGAGCTCCA ATGGGGATGG CTGATATAGC CGAAGTCCTT TGGCGTGATT TCTTAAAACA TAACCCAACT AACCCGCAGT GGGCCGATCG TGACCGTTTT GTTCTGTCTA ATGGCCATGG ATCAATGCTG ATTTACTCGC TGCTGCATTT AACCGGTTAT GCATTGTCAA TTGAGGATCT TAAATCGTTC CGTCAACTGC ATTCTAAAAC ACCTGGACAT CCTGAATACG GTTACGCACC GGGTATCGAA ACAACAACAG GTCCGTTAGG TCAAGGTCTG ACTAATGCGG TGGGTATGGC GATTGCTGAA AAATCATTAG CAGCACAATT TAACCGTCCA GCGCACGATA TCGTTGATCA TTTTACTTAT ACTTTCTTAG GTGATGGTTG TTTAATGGAA GGGATCTCAC ATGAAGCTTC CTCATTAGCG GGTACTTTAG GACTCGGAAA ACTGATTGCA TTCTGGGATG ACAACGGAAT TTCAATCGAT GGTAACGTTG ATGGTTGGTT TACGGATGAT ACACCGGCAC GTTTTAAAGC ATACGGCTGG CAGGTAATTT CTGTTGATGG CCATAACAGC GAAGAGATTA AAGCGGCGAT TATCGCAGCT CAAGCTGAAA CATCTAAACC AACGATGATT TGTTGTAAAA CCATTATCGG TTTTGGTGCG CCAACCAAAC AGGGTACACA TGGCTGTCAC GGTGCGCCAC TTGGTGCCGA TGAAATAATC GCAACACGTA AAGCATTAGG CTGGAACTAC GGTGATTTTG AAATTCCTGC AGATATCTAT GCCGGTTGGG ATAATAAAGA ACAGGGGCAA GCCCTTGAAA ATTCATGGGA TGAACAGTTT GCCGCATATG CAAGCGCGTA CCCTGAATTA GCCGCTGAAT ATAAGCGTCG TATCAATGGC GACATGCCAA GCGACTGGGA AGTTAAATCA ACGCAGTATA TCGAGGAATT ACAAGCGAGT CAGGCGAATA TTGCAACCCG TAAAGCGTCA CAAAACTGCA TCGAAGCATT TGGCACAATG TTGCCTGAAT TATTAGGTGG CTCTGCCGAT TTAGCCCCTT CGAACCTGAC TATGTGGTCT GGTACTAAAG CGATTACTGC TGATGACGCG TCGGGCAACT ATTTACACTA CGGTGTACGT GAGTTTGCAA TGTCAGCCAT TGTTAACGGT ATTGCTTTGC ATAAAGGTTT TGTGCCCTTT GGCGCAACCT TCTTAATGTT TATGGAATAT GCGCGTAATG GTTTACGTAT GTCGGCCTTA ATGAAGCAGC GTGCGATTCA AGTATTCACC CATGACTCAA TCGGTCTGGG CGAAGATGGG CCCACTCATC AACCCGTTGA ACAAATTGCC AGCTTGCGTT TAACTCCAAA TATGAACACC TGGCGCCCTT GTGACAGCGT AGAGTCTGCC GTTGCCTGGA AATCAGCCAT TGAGCGAATC GATGGTCCAA CATCACTGGT CTTCAGTCGT CAAAATCTGC AACCTCAAGC GCGTGATGCA CAGCAGCTCA GCGATGTCGC TAAAGGTGGT TATGTCTTAC TTGAAAGTAA AGAGTTTGAC AGTGCAAATT CAGCGTCGAT TATGCTGATT GCAACGGGTT CTGAAGTACA ACTTGCTGTT GAAGCCTACA ACGAATTAAC AGCACAGGGT AAAGCGGTAC GTGTTGTGTC TCTTCCTTGT ACAGATATTT TTGAAACTCA AAGTGCCGAG TATAAAGAGT CTGTTCTACC TGCCCTTGTG ACTAAACGTC TGGCAATAGA GGCCGGTATT GCTGATTACT GGTACAAATA TGTTGGCCTA AATGGAAAAG TTATTGGTAT GACCACCTTT GGTGAGTCAG CACCCGCTGA ACAGTTATTT AAAATGTTTG GTTTCACCGT AGAAAACGTT GTTGAGTCCG CTCAGACTTT ATAA
|
Protein sequence | MPPRKELANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WRDFLKHNPT NPQWADRDRF VLSNGHGSML IYSLLHLTGY ALSIEDLKSF RQLHSKTPGH PEYGYAPGIE TTTGPLGQGL TNAVGMAIAE KSLAAQFNRP AHDIVDHFTY TFLGDGCLME GISHEASSLA GTLGLGKLIA FWDDNGISID GNVDGWFTDD TPARFKAYGW QVISVDGHNS EEIKAAIIAA QAETSKPTMI CCKTIIGFGA PTKQGTHGCH GAPLGADEII ATRKALGWNY GDFEIPADIY AGWDNKEQGQ ALENSWDEQF AAYASAYPEL AAEYKRRING DMPSDWEVKS TQYIEELQAS QANIATRKAS QNCIEAFGTM LPELLGGSAD LAPSNLTMWS GTKAITADDA SGNYLHYGVR EFAMSAIVNG IALHKGFVPF GATFLMFMEY ARNGLRMSAL MKQRAIQVFT HDSIGLGEDG PTHQPVEQIA SLRLTPNMNT WRPCDSVESA VAWKSAIERI DGPTSLVFSR QNLQPQARDA QQLSDVAKGG YVLLESKEFD SANSASIMLI ATGSEVQLAV EAYNELTAQG KAVRVVSLPC TDIFETQSAE YKESVLPALV TKRLAIEAGI ADYWYKYVGL NGKVIGMTTF GESAPAEQLF KMFGFTVENV VESAQTL
|
| |