Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0314 |
Symbol | gcp |
ID | 4624892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 414336 |
End bp | 415361 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639795512 |
Product | O-sialoglycoprotein endopeptidase Gcp |
Protein accession | YP_941779 |
Protein GI | 119944099 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0725193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTT TAGGTATTGA AACTTCATGT GATGAAACCG GTATCGCCAT TTATGATGAT CAACTAGGTT TGTTATCGCA TCAGTTATAT AGTCAAGTTG AATTACATGC TGACTACGGT GGTGTGGTAC CTGAGCTTGC CTCTCGAGAT CATGTACGTA AAACTATTCC GTTAATTAAA GAAGCATTAG TGGCTGCAAA TTGTACCAAA GAGAGTCTTG ATGGTATTGC TTATACTGCT GGACCAGGGT TAGTAGGAGC GTTATTAGTA GGGTCATGTA TTGGGCGCAG TCTGGCCTAT GCGTGGAATA TACCGGCTAT TGCAGTACAC CATATGGAAG GGCATCTACT GGCCCCTATG CTCGAAGAAA ATCGTCCGGA ATTTCCGTTT TTGGCGTTGC TGGTATCGGG CGGCCATACG CTGATGGTTG AGGTTGAAAA TATTGGTGAA TACCAGGTAT TAGGTGAAAG TATTGATGAT GCTGCTGGAG AGGCCTTTGA TAAGACAGCC AAATTACTTG GACTCGATTA TCCGGGTGGA CCGCGTTTGG CAAAATTAGC TGAAAAGGGG GAGCCCAAAC GCTTTATTTT TCCACGACCA ATGACCACTA AACCTGGACT TGATTTTAGT TTTAGTGGAT TAAAAACCTT TGCGGCTAAT ACCATTGCCA AGGAAGGTAA AGATCCGCAA ACTCAGGCAG ATATTGCCTT GGCATTTCAG GATGCGGTCA TCGATACGGT TGCTATCAAA TGTAAGCGTG CTTTAAAACA AACAGGATTA AAGCGCTTAG TTGTGGCGGG TGGCGTCAGC GCCAACCTGT CTTTGCGTAG CCAATTGGCC GTTTTAATGA AATCCCTTGG TGGTGAAGTT TTTTATCCCC GCAATGAATT TTGTACGGAT AACGGTGCAA TGATCGCTTA TGCGGGTATG CAGCGCTTAA AAGCCGGGCA TTTTGAAGGC TTGGGGATTC AGGCAAAACC AAGATGGCCT CTTGATCAGC TGCTTAGCGT GCGCAGCGAG CTCTGA
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Protein sequence | MRILGIETSC DETGIAIYDD QLGLLSHQLY SQVELHADYG GVVPELASRD HVRKTIPLIK EALVAANCTK ESLDGIAYTA GPGLVGALLV GSCIGRSLAY AWNIPAIAVH HMEGHLLAPM LEENRPEFPF LALLVSGGHT LMVEVENIGE YQVLGESIDD AAGEAFDKTA KLLGLDYPGG PRLAKLAEKG EPKRFIFPRP MTTKPGLDFS FSGLKTFAAN TIAKEGKDPQ TQADIALAFQ DAVIDTVAIK CKRALKQTGL KRLVVAGGVS ANLSLRSQLA VLMKSLGGEV FYPRNEFCTD NGAMIAYAGM QRLKAGHFEG LGIQAKPRWP LDQLLSVRSE L
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