| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0307 |
|---|
| Symbol | |
|---|
| ID | 4624884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 405342 |
|---|
| End bp | 406508 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639795504 |
|---|
| Product | glucose sorbosone dehydrogenase |
|---|
| Protein accession | YP_941772 |
|---|
| Protein GI | 119944092 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTA TTATGCACTT ACTATTTAAA TCCAAGTTAC TTTTAACAAG CGACTTTCTT
CTCTTATTGT CTCTTCTTTC CTGTAATGCC TTTGCCGAGC CTGCTGCTCA AAAGATTGAA
GGTAATGCAG GCTCAATACT TCTGGCCGAA AGTTTTGCAA CATTCAATGA ACCCTGGGCT
ATGACATTTC TACCCAGCGG TGAGCTCCTG ATAACTGAAA AAAAAGGTAC TTTGCTTCTG
GTTGACCCGA ATGACAGTTC TAAGATAGTT GTTAAGGGCG TACCCAAGGT AGCCTATGGT
GGTCAGGGTG GTTTAGGTGA TATCATTCTC CATCCTCAGT ACAAAGAAAA CCACTGGATA
TACTTGTCCT ATGCCGAAAA AGACAGGTCA GGAAACACCG GAGCCGTCGT TGCCCGAGCT
AAACTTATTC ATGCATCGGC AAAGCCTCAA CTGGAAAACC TTGAAGTCAT CTGGCGGCAA
ATACCTAAAG TATCAGGCAG CGGACATTAT TCACACCGAT TGGCATTTAG CCCCAATGGA
AAGCTGTTTA TTACTTCCGG CGAACGGCAA AAACAGGCAC CAGCACAGAG CTGGATGCAA
AATCTGGGCA AGGTCATCAG ACTAAACGCG GACGGTTCAG TCCCATCAGA CAATCCATTT
CAGGATAAAG GAGAACTTGC AAAAACCTTC TGGTCTCTCG GGCATCGCAA TTTACTCGGT
ATGGCCTTTG ATAAAAAGGG CCAACTGTGG ACACACGAAA TGGGCCCGAG GCACGGTGAC
GAATTCAACC TGACCATTGG TGGTGATAAT TATGGTTGGC CCATTGTGTC CTGGGGTGAT
CAATATTCTG GTATTCCCAT TCCCGATCAT GATTCGCGTC CTGAGTTCAA TCCACCTGAA
GTATATTGGG TACCAACGGT TGCACCATCA GGTCTGATTA TATATTCCGG TGTTATGTTC
CCGAAATGGC AGGGTAATGC TTTTATCGGT GGGCTCAAGT CAAAATCACT GCTGCGTATT
AAAATTGAAG GCTTTCAAGC CGAGGAAGTC GAACGTTTCA CAATGGAAAA ACGGATACGA
GAGGTTGAGC AAGGACCAAA CGGAGCAATA TGGGTTCTTG AGGATCAAAA AGGGGGTCGT
CTTCTGCGGC TCAGTGCATA TGAATGA
|
|---|
| Protein sequence | MDIIMHLLFK SKLLLTSDFL LLLSLLSCNA FAEPAAQKIE GNAGSILLAE SFATFNEPWA
MTFLPSGELL ITEKKGTLLL VDPNDSSKIV VKGVPKVAYG GQGGLGDIIL HPQYKENHWI
YLSYAEKDRS GNTGAVVARA KLIHASAKPQ LENLEVIWRQ IPKVSGSGHY SHRLAFSPNG
KLFITSGERQ KQAPAQSWMQ NLGKVIRLNA DGSVPSDNPF QDKGELAKTF WSLGHRNLLG
MAFDKKGQLW THEMGPRHGD EFNLTIGGDN YGWPIVSWGD QYSGIPIPDH DSRPEFNPPE
VYWVPTVAPS GLIIYSGVMF PKWQGNAFIG GLKSKSLLRI KIEGFQAEEV ERFTMEKRIR
EVEQGPNGAI WVLEDQKGGR LLRLSAYE
|
|---|
| |