Gene Ping_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0288 
Symbol 
ID4624539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp375301 
End bp375711 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content36% 
IMG OID639795485 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_941753 
Protein GI119944073 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTG AAATCACAAG TAAACAAATT ACTATCACTG ATACAATGCG CACCAAAGTA 
GAGGAACGGT TCGAAAAACT AGAAAAACTA CAAATTCCTC TTATCACTCC CCACGTCATT
ATCACCAAAG AGCCTAAAGG CGTAAAAATA GAAGCCACAA TTAACGTTCC TAATGATAAG
ATTTTTGCAC ATGCACAGAA CGATGATTTG TATGTAGCAA TTGGACAATT ATTTCAAAAA
TTAGAACGTC AGTTGACTAA ATACCTCCAT AAATCTGAAG CGAGTCGCGC AAAAAATAAC
GGTAAAGATA TGTGCCGAAC AGGAGAAATT TCAGGCGAAG CGATTGAAGA ACCAGAGATT
GAAATTGAAT CAGATGCTGA AATAAAATTA AATAAAGAGT TCGCAGCATA A
 
Protein sequence
MRIEITSKQI TITDTMRTKV EERFEKLEKL QIPLITPHVI ITKEPKGVKI EATINVPNDK 
IFAHAQNDDL YVAIGQLFQK LERQLTKYLH KSEASRAKNN GKDMCRTGEI SGEAIEEPEI
EIESDAEIKL NKEFAA