Gene Ping_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0219 
Symbol 
ID4627157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp274322 
End bp275290 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content39% 
IMG OID639795408 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_941685 
Protein GI119944005 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.440436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.968546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAC TGAATGAACA GGGTAATATT CTTTTAACGT TACTTGCCGA TGGAGAGTTT 
CATTCGGGTG AAAAAATAGG CGAACTTCTA GGTGTTTCGC GTACCTCGGT TAATAACTAT
ATCAAAGGGT TACAAGGGAT TGGCGTTGAT ATTTATAAAG TCCCCGGGCG TGGTTATCAA
AGTGCTACGC TGATTAAATT ATTAAATGAG CAGAAAATTC GCCAACTTTG TGGGTATGAC
AATATAAAAG TTGAGCAAAT TGTTGATTCG ACAAATCAAA TTTTATTAGA TCAAATCCCT
CATTTAGAAA ATGGGCAAAC ATGTATTGCT GAATATCAGT TAGCAGGAAG GGGAAGGCGA
GGCCGTACTT GGGTTTCACC CTTTGCTTCT CATCTGTATT TTTCATTTTA TTGGTATTTC
GATTCGGGTA TAGATAAAAT CTCGGGGCTG AGTTTACTGG TGGGTATCGC AGTAGTTAAT
ACGCTGGAAA AAATGGGCAT ACAGGGCGTT TCATTAAAGT GGCCAAACGA TATTTATTAC
CAGGGAAAAA AATTGGCGGG TATTTTAATT GAGTTAAATG CCCAGGCAAC AGCCGCTTGC
CACTGCGTGA TAGGGATCGG TATTAATATC AAAATGCCGC CTGAGCAGGC GAAATTAATA
AACCAACCCT GGGCTGATTT AAATGCATTA ATACCAACGG GTGTGGATCG CAACGAATTA
AGTGCCATTT TAATTAAAGA GCTGCAATAT TTATTACCCC GTTATGAAAA ATCTGGTTTA
ACGCCCTATT TATCCCGCTG GTTTGAATTA GATTGTTTTT TAGATAAAAA AGTCAACTTA
CTGATTGCAG ACACCATCAC TATGGGCATC TGCCGCGGTG TTAATAGACA TGGCGCGCTG
TTATTGGAAA TAGAGGGTCA AGTTAAAGAG TTCATCGGTG GAGAGATTTC TTTACGTTTG
GCAAATTAA
 
Protein sequence
MSELNEQGNI LLTLLADGEF HSGEKIGELL GVSRTSVNNY IKGLQGIGVD IYKVPGRGYQ 
SATLIKLLNE QKIRQLCGYD NIKVEQIVDS TNQILLDQIP HLENGQTCIA EYQLAGRGRR
GRTWVSPFAS HLYFSFYWYF DSGIDKISGL SLLVGIAVVN TLEKMGIQGV SLKWPNDIYY
QGKKLAGILI ELNAQATAAC HCVIGIGINI KMPPEQAKLI NQPWADLNAL IPTGVDRNEL
SAILIKELQY LLPRYEKSGL TPYLSRWFEL DCFLDKKVNL LIADTITMGI CRGVNRHGAL
LLEIEGQVKE FIGGEISLRL AN