| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0189 |
|---|
| Symbol | |
|---|
| ID | 4626834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 239372 |
|---|
| End bp | 240769 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639795379 |
|---|
| Product | O-succinylbenzoic acid--CoA ligase |
|---|
| Protein accession | YP_941656 |
|---|
| Protein GI | 119943976 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.582963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGC AACTGAGTTT TTGCCCTGTC CGTCATCAGG CGATTATCAA TGCGAATGCG
CTAGCCATCG AGTCTGACGG GGTCTCGCTC ACCTACCAGC AGTTAGACAA TAGACTCAAC
ATATTAAGCA GACAGCTGCT GAATCTACAT TTAAAAGCGG GAGACAGGTT AGTCTGTATC
TCGGAAAATT CTCTTAAGGT GATTTTACTG CAGCTCACCT GCATACGCTT AGGGCTTATT
TTCTGTCCTT TAAATCCGCG TTTTAGTGCG GCTGAAATCG AGCAACGTTT AAACGTTCTG
AAAAGTGACT TTATTTGGCT TGCCAATCCG CAAAAACATT CGCATTTAAG CAGCCTTGCA
ATAGACTTTT CAATTTACCC TAAAGGGGTA GTGGCTCCTG CACCGCTAAA AATAGATCCC
CAAAAAGTCT GTAATATCAT TTTCACATCC GGTAGTAGTG GTCAGCCAAA GGCTGTTATG
CACTGTTTTA GCAATCATTA TTATAGTGCT ATTGGTTCAC AATACGGTAT TGCATTACGG
GCAAAAGATA GAAATCTCTT GTCATTGCCC CTGTTCCATA TCAGTGGATT CGCAACGGTT
ATCCGTACAT TGATAGCCGG AGCCACCTTG GTTGTTAGCG CTGAAAAACT CTGTGTTAGT
TTATTAAAAA AGGAGAAAAT AACCCACCTT TCTTTGGTTG CCACACAGCT TTATCGTTTA
TTAAGCAGCT TAGATTTTCA GCAAAAGGAA CTCTCAATTA AACACCTTCT TCTGGGTGGC
AGTCTTTTTT CTGACCGGTT GTTGGTGCAA ACCAGGCAAC GGGGGTTTGT GTATCATTTA
AGTTATGGTT TAAGTGAGAT GAGCTCACAG GTTGCCACCT CCACCAACAG TAAAAAATTG
ATCCTGTTAC CCGGTCAGCA GGTAAAAATA ATAAATAATG AGATCTGCTT ACGTGGAAAA
ATGCGCTTTG CAGGCTATTT TAATGGTCAT TTAGACTCCA GTCGTTTGCC TGAAGATCAA
TGGTTTGCCA GTAAAGATTT AGGCGCATTA ATGGGCAATG AGTTATGTAT TTTAGGTCGT
ACAGACAGGT TAATTATCTC CGGTGGCGAA AATATTCAGG CTGAAGAACT GGAGTCAATA
CTGTTAAACT TTGCACATAT TAAACAGGCT TATATTGTTG CTGTAACGGA TCCTGTTTTT
GGAGAGCGCC CGGCAGCTTT TATAGATTGG GAAAATGGTA AGATTAAACA ACAACAACTA
CAGATTTACC TGCAGGATAA ACTGAGCAGT TATAAGCAGC CAGTACATTA TTTTACTCTG
CCTGAGCAAA CAGGCCTTAA AGTGTCATTA AGAGAGCTGC AGGTAATTGC TCAGGTCGCC
CACAACATGA CCTTATAA
|
|---|
| Protein sequence | MDKQLSFCPV RHQAIINANA LAIESDGVSL TYQQLDNRLN ILSRQLLNLH LKAGDRLVCI
SENSLKVILL QLTCIRLGLI FCPLNPRFSA AEIEQRLNVL KSDFIWLANP QKHSHLSSLA
IDFSIYPKGV VAPAPLKIDP QKVCNIIFTS GSSGQPKAVM HCFSNHYYSA IGSQYGIALR
AKDRNLLSLP LFHISGFATV IRTLIAGATL VVSAEKLCVS LLKKEKITHL SLVATQLYRL
LSSLDFQQKE LSIKHLLLGG SLFSDRLLVQ TRQRGFVYHL SYGLSEMSSQ VATSTNSKKL
ILLPGQQVKI INNEICLRGK MRFAGYFNGH LDSSRLPEDQ WFASKDLGAL MGNELCILGR
TDRLIISGGE NIQAEELESI LLNFAHIKQA YIVAVTDPVF GERPAAFIDW ENGKIKQQQL
QIYLQDKLSS YKQPVHYFTL PEQTGLKVSL RELQVIAQVA HNMTL
|
|---|
| |