| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0176 |
|---|
| Symbol | |
|---|
| ID | 4626821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 223829 |
|---|
| End bp | 225058 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639795366 |
|---|
| Product | fused tRNA nucleotidyl transferase and 2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
|---|
| Protein accession | YP_941643 |
|---|
| Protein GI | 119943963 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.631459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATAT TTTTAGTTGG AGGCGCAGTT CGTGATCAAT TATTACAACT TAAGGTTAAA
GATCGAGATT ATGTAGTGAT CGCAGCCACC CCGGATAAAC TATTAAAGTT AGGTTTTCAG
CAAGTAGGTA AAGATTTTCC CGTTTTTATC CATCCTCAAA CGGGTGATGA ATATGCCCTC
GCACGCACTG AGCGAAAAAA AGGTTCCGGT CATAATGGAT TTGAATGTTA CGCTGGCCTG
GATGTCACTC TCACGGAAGA CTTAAAACGC CGAGATTTAA CCATTAATGC CATTGCACAA
TCACCACAGG GAGAGTTGAT TGATCCCTAC CACGGGCTGC AGGATATACA GACCAAAACC
CTGCGTCATA TATCGACAGC ATTTAGCGAA GATCCGTTGC GCGTTTTACG CGTTGCACGC
TTCGCTGCGC GTTTTTACGA TTTAGGCTTC AAAATTGCCC CGGAAACGCT CGATCTGATG
CGCAGCTTAA GCAGTAGTGG TGAGTTAAAT CATCTGACCG CAGAAAGGGT TTGGCAGGAA
ACCGCAAATG CGTTAAAAAC CAATAACCCG CAGATCTATT TCCAGGTGTT ACGCGACTGT
GGTGCTCTGC CGCTTTTATT CCCCGAAATT GAAGCATTAT TTGGTGTTCC TGCACCTAAA
AAATGGCATC CTGAAATTGA TACTGGCATA CATACTTTAA TGGTTGTAGA ACAATCAGTA
AAATTATCCG ATTCACTTGC GTTTCGTTTT GCCTGCCTGG TACACGACCT TGGTAAGGCG
CTAACACCCA AGGAACTCTG GCCCAGCCAT AAAGGTCATG GGAAATTGGG TTTGCAGCTG
ATTAACAACT TATGTGAACG TCTTAAAATA CCCAATGAAT GCAGAGAATT GGCCTGTTTA
GTCAGTGAGC ACCATACGCT TATCCATAAG GGGTTGGAGT TAGAAGCAGA CAGCCTAATC
ACATTAATGG ATCAAAACGA TGCATGGCGT AAGCCTGAAC GGTTTTCGCA AATGTTACAG
TGCTGCGTTG CCGACTCTAA GGGCCGAACC GGTTTTGAAG AGAAAGACTA CCCCAGTGCA
GATTATATTT GGCGTGCTTT TCAAGTGGCA CAGTTAGTTG ATGTACAACC AATTATTAAG
CAAGGATATC AAGGTGCAGA GATTAAAGCT CAGTTAAAAC ATGCACGTAT TCGATCAGTC
GAACAGTATA AACAGAAGCA CAGCGTATAA
|
|---|
| Protein sequence | MQIFLVGGAV RDQLLQLKVK DRDYVVIAAT PDKLLKLGFQ QVGKDFPVFI HPQTGDEYAL
ARTERKKGSG HNGFECYAGL DVTLTEDLKR RDLTINAIAQ SPQGELIDPY HGLQDIQTKT
LRHISTAFSE DPLRVLRVAR FAARFYDLGF KIAPETLDLM RSLSSSGELN HLTAERVWQE
TANALKTNNP QIYFQVLRDC GALPLLFPEI EALFGVPAPK KWHPEIDTGI HTLMVVEQSV
KLSDSLAFRF ACLVHDLGKA LTPKELWPSH KGHGKLGLQL INNLCERLKI PNECRELACL
VSEHHTLIHK GLELEADSLI TLMDQNDAWR KPERFSQMLQ CCVADSKGRT GFEEKDYPSA
DYIWRAFQVA QLVDVQPIIK QGYQGAEIKA QLKHARIRSV EQYKQKHSV
|
|---|
| |