Gene Ping_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0149 
Symbol 
ID4626354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp193517 
End bp194719 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content35% 
IMG OID639795339 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_941616 
Protein GI119943936 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGGA AAACAGAAAA ACTGGGTAAC GTTTGTGAAA TTATTAAACG TGGTATTGCA 
CCGAAATATG TTGATGAAGG TGGTATATGT GTAATTAACC AAAAGTGTAT TAGAGATCAT
ACTGTTAATT ATTCATTAGC AAGGCGTCAT AATCTAATCA TAAAAAGTGT CAATGAAGAG
CGATATGTTC AAGTTGGTGA TGTATTAATT AATTCAACTG GAACAGGTAC CCTAGGGCGA
GTTGCTCAGG TGAGAAATAT GCCTATAGAG CCTACAACTG TAGATACACA TGTAACTATT
GTAAGACCTA AAAACGGTTT ATTTCATAAC GACTTCTTTG GTTATATGCT CATTAAGATC
GAGGAAGAGA TTACTTCAGC TGGAGAAGGT GCAAGCGGTC AGACTGAATT AGCAAGAACT
AAACTACAAA ATGATTTTTT CGTTTCATAC CCTGATTCAA TCCAAGAACA AAAACGCATT
GTGGTACTGC TCGACACCGT GTTTGCCGAC TTAGAACAAA CCCGCACAAA AACCGAACAA
AACCTAAAAA ATGCCCGCGA GTTATTCGAC AGCTACTTAC AACAATTATT CAGTAAAAAA
AGCGAAGGAT GGGTTGAGAA AACATTAAGT GAAATTGCAC ATGTAGGTAC CGGGGGAACC
CCGCTAAAAT CAACAATTGG ATTCTGGGGG GGAGACATTC CTTGGTATTC TTCTGGTGAG
TTAAACGACA CGTATACATT AGCTTCAAAA AATAAAATTA CAGAAGTAGG GTTAAGCGGA
TCTAATGCGA AATTATTCCC AAAAGGCTCG TTGTTAATAG GTATGTATGA CACAGCAGCT
TTAAAAATGT CAATTTTAGA TCGCGATGGG ACATTTAACC AAGCTGTAGC GGGTGTTAAA
CCGAACCCCA AAATAAATTT AGAATTTATA CTTCATTCAA TTAACGTTAT TAAGCCAGAG
TTATTAAAGC TTAGAAGAGG CGTCCGTCAA AAAAATCTCA ATCAAAGTAA AATTAAAAAT
ATACCAATTA GGTTACCAAC AATTGCAGAA CAAATAAAAA TTGTCGCTGA AATTAATGAT
CTAGAAGAAA AAACTAATTT ATTGGTAAAT ATTTATAGTC AAAAAATAAC TTCAATAGAC
GAACTCAAAA AATCGATCTT ACAAAAAGCC TTTAGTGGAG AGTTAAGCAC AGTGGCTAAG
TAA
 
Protein sequence
MEWKTEKLGN VCEIIKRGIA PKYVDEGGIC VINQKCIRDH TVNYSLARRH NLIIKSVNEE 
RYVQVGDVLI NSTGTGTLGR VAQVRNMPIE PTTVDTHVTI VRPKNGLFHN DFFGYMLIKI
EEEITSAGEG ASGQTELART KLQNDFFVSY PDSIQEQKRI VVLLDTVFAD LEQTRTKTEQ
NLKNARELFD SYLQQLFSKK SEGWVEKTLS EIAHVGTGGT PLKSTIGFWG GDIPWYSSGE
LNDTYTLASK NKITEVGLSG SNAKLFPKGS LLIGMYDTAA LKMSILDRDG TFNQAVAGVK
PNPKINLEFI LHSINVIKPE LLKLRRGVRQ KNLNQSKIKN IPIRLPTIAE QIKIVAEIND
LEEKTNLLVN IYSQKITSID ELKKSILQKA FSGELSTVAK