| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0077 |
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| Symbol | |
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| ID | 4626631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 103658 |
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| End bp | 104740 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639795273 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_941550 |
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| Protein GI | 119943870 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.820269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAA ACCTAATTAC AGCTTTCTTG ATAGGTATTG TGGTTTCTGT TGTGGCAATC
GCCGACACCC TTACTCTAAA AGATAATCAC CCCGAAACCT ATGAAGTTGT TAAAGGAGAT
ACTTTATGGG ATATTTCTGC TCATTTTTTA AACTCCCCCT GGTTGTGGCC ACGTTTATGG
CAAAAAAACA GTCAAATTAA AAATCCCGAC CTCATTTATC CCGGTGATAT ATTAACCTTG
ATTTGGGTTG ATGGAGAGCC TCAACTTTCC CGTAAGATAT TAAAAAAATT ATCACCAACA
CCAAGATTAC AGGAAAAACA GGCAGCCATC CCAACGATTC CCTTAGCTTC TATCTCCTCT
TTTTTATCAA GAGACCATAT CATTGATCCG GCGTTATTGA CTGGTGCACC TCGTTTACTC
GGCGATGGAA AGGCAACTCC TCGTTTCTTT GAAGGAGATA TCTTTTATGG GCAGGGACAA
TACGATAAAG GTAAGTTGTA TGGTGTTTAT CGTTTAGGTG AAGACTATAT AGATTCTGTC
AGTAAAGAAT TTTTAGGCAA GCAACTGATT TTTATTGGCC TCTCAGAAGT CTCTAAAAAC
CCAAATGTTA GCGGCACCGA GCAGGTCACT CCGCATGATT TTATAAGCAG CTCAAGGGAA
GCCCGTCAGG GGGATTTAAT ATTACCCATT CCGGAATATG AAACACTGCC AGCCTATTTT
TTGCCCCAAT CAGTTCCAAA AACAATGCAA GGTCAGATTA TTGCTGCACT TAACAATTCA
AAAGCAGCTG GTAAGTGGGA TATTGTGGTG ATCAACAAAG GTCAGCGAGA TAATGTTCAA
ATAGGCTCTA TGTTTTCTAT TTTAAGGTCG GGACCGGGTA TTTTAATTAA TAAAAATAGC
GTTGTTTATC AAAAGTATGC TTCAAAACTT GACCAAATAG GAAGCCCTGA TATTAAAATA
CCCGCAGAGC GTATTGGTGA ACTATTGGTA TTTAGAGTCT ATGATAAAGT AAGTATCGCT
ATGATAATGC GCAGCACCGA GGTAATAGCC CCAAATTATA AAATACAAGG CCTAGCGTTT
TAG
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| Protein sequence | MKLNLITAFL IGIVVSVVAI ADTLTLKDNH PETYEVVKGD TLWDISAHFL NSPWLWPRLW
QKNSQIKNPD LIYPGDILTL IWVDGEPQLS RKILKKLSPT PRLQEKQAAI PTIPLASISS
FLSRDHIIDP ALLTGAPRLL GDGKATPRFF EGDIFYGQGQ YDKGKLYGVY RLGEDYIDSV
SKEFLGKQLI FIGLSEVSKN PNVSGTEQVT PHDFISSSRE ARQGDLILPI PEYETLPAYF
LPQSVPKTMQ GQIIAALNNS KAAGKWDIVV INKGQRDNVQ IGSMFSILRS GPGILINKNS
VVYQKYASKL DQIGSPDIKI PAERIGELLV FRVYDKVSIA MIMRSTEVIA PNYKIQGLAF
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