Gene Phep_4282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4282 
Symbol 
ID8255418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5160978 
End bp5162534 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content44% 
IMG OID644937948 
ProductPglZ domain protein 
Protein accessionYP_003094535 
Protein GI255534163 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.769544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAG AGACTAAGAT TTTATGGGCC GATGATGAGA TCAACTTATT AAAACCACAT 
ATATTACTAT TAAACGAAAA GGGGTACCAT GTAACTACCT TTACCAATGG CAACGATGCC
CTGGAGGCCT TTGGAAAGGA GCATTTTGAC CTGGTTTTCC TGGATGAAAA TATGCCCGGG
CTAAGCGGAC TGGAAACCCT GACCGCCATC AAGAACATCA GGAATGATGT TCCTGTAGTT
CTGATCACCA AAAGTGAAGA AGAAAACCTG ATGGAGGACG CCATCGGCTC AAAGATTGAC
GACTACCTGA TCAAACCTGT AAACCCTAAA CAGGTATTGC TGACCATTAA AAAGATCATA
GACAATAAAA GACTGGTCAG CGAAAAAACA TCTATGGCCT ACCAGCAGGA CTTCAGACGA
CTGGGCATGA CCCTGAACGA CAAGCTGAGC TATGAAGAGT GGGTAGAAGT TTATAAAAAA
CTGGTATTCT GGGAGCTGGA ACTCGAAAAA CTGGATGATC CGCAGATGCA CGAAATCCTG
ACGATGCAAA AATCCGAAGC CAATATGCAG TTTTCAAAGT TTATTGAAGA CCATTACCTG
GGCTGGGTAA ACGGTAAGGG CCAGGCCCCG CTTTTGTCAA ATGACCTGCT GAAAAAGAAA
GTTTTTCCTT TGATCAACAG TACTACCCCT GTTTTTTTTA TTTTGATCGA TAATCTGCGT
TACGACCAGT GGCGCATTAT CAATCCGCTG ATTACCGAAC ATTTCCGGAT GGACGATGAA
GATATTTATT CCAGCATTTT GCCTACAGCT ACACAATATG CCAGGAACGC CATATTTTCC
GGTCTTATGC CCCTTGAAAT GGAGCGCCGC TTTCCGGGGT TATGGCAGAA CGATGATGAT
GAGGGCGGAA AAAACATGCA CGAGGGAGCC TTTCTGGCCG ACCAGATCAA ACGTCAGCTG
CGTAAGGACT GCAAGTTCAG CTACAATAAG ATCCTGACCT ATGATGATGG CCGGGCTTTG
AACGAGCAGG TCAACAACCT GATGCAAAAT GAATTCAATG CCATCGTTTA CAACTTTGTA
GACATGCTTT CGCATGCCCG CACTGATATG CAGATGATCC GTGAACTGGC CAATGACGAT
GCAGCTTACC GTTCTTTAAC GCTTTCCTGG TTTGAACATT CGCCCTTAAT GGACCTGCTT
AAAAAAATCT CGCAGAAAAA GGTTAAAGTG GTGATCACGA CCGACCACGG CACCATCCGG
GTTAAACATC CGAGCAAGGT GATCGGCGAC AGGAACACCA ATACCAACCT CCGCTATAAA
CAAGGCCGAA ACCTTAATTT TAATGCCAAA GAGGTATTTC TGATCAAAAA CCCCCATGAA
GCACAATTGC CGAAGATCAA CATCAGTTCC AACTACATCT TTGCAAAAGA GGACCGTTAT
TTTGTTTACC AGAACAACTA TAACCAGTTT GTAAATTATT ACAATGAGAC TTTTCAGCAC
GGGGGCATTT CATTAGAGGA AATGATCATT CCTATTGCAA CATATAGTTC AAGGTAA
 
Protein sequence
MMQETKILWA DDEINLLKPH ILLLNEKGYH VTTFTNGNDA LEAFGKEHFD LVFLDENMPG 
LSGLETLTAI KNIRNDVPVV LITKSEEENL MEDAIGSKID DYLIKPVNPK QVLLTIKKII
DNKRLVSEKT SMAYQQDFRR LGMTLNDKLS YEEWVEVYKK LVFWELELEK LDDPQMHEIL
TMQKSEANMQ FSKFIEDHYL GWVNGKGQAP LLSNDLLKKK VFPLINSTTP VFFILIDNLR
YDQWRIINPL ITEHFRMDDE DIYSSILPTA TQYARNAIFS GLMPLEMERR FPGLWQNDDD
EGGKNMHEGA FLADQIKRQL RKDCKFSYNK ILTYDDGRAL NEQVNNLMQN EFNAIVYNFV
DMLSHARTDM QMIRELANDD AAYRSLTLSW FEHSPLMDLL KKISQKKVKV VITTDHGTIR
VKHPSKVIGD RNTNTNLRYK QGRNLNFNAK EVFLIKNPHE AQLPKINISS NYIFAKEDRY
FVYQNNYNQF VNYYNETFQH GGISLEEMII PIATYSSR