Gene Phep_4280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4280 
Symbol 
ID8255416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5158461 
End bp5159534 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content45% 
IMG OID644937946 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 
Protein accessionYP_003094533 
Protein GI255534161 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0236806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTTA CTGCCAAGCA GATAAGTGAG TTTATAGATG GTACCATTGA AGGCGATGAG 
CGCGTTGGGG TTAGTGAGCT TTCCAAAATA GAAGATGGGA AGGCCGGTTC ATTGTGCTTT
CTGTCCAACC CCAAGTACGA GAACTATTTA TATTCCACAA GTGCTTCAGT AGTTATTGTT
GGAAAAGACT TTGTCCCTTC GCAGCAGGTG AACAGCACGT TAATCCGTGT GGCAGATCCT
TACAGTGCCT TTTCTGTTTT GCTGGAAAAA TATAACGAAG TGGTGAACCA GAACAGTGCA
CAGGTAGGTA TTGAGCAGCC CAGTTTTATT CACCCCTCGG CAAAAATCGG TAAAAATGTT
TTTATAGGAG CTTTTAGCTA TATTGCTGAA AATGTAGAGA TTGGCGATAA CTGCAAAGTT
TCTCCGCAGG TATACATTGG TGCTGATTCT GCTTTGGGTA GGAACTGTAC TTTGTTTCCC
GGAGTGAAGT TGTATAACCG GTCTGTTTTG GGCAATAACA TCATTATACA TTCCAACACT
GTAGTTGGGA GCGATGGTTT TGGTTTTGCT CCCCAGGCCG ATGGGACCTA TACAAAAATT
GCGCAGATCG GTAATGTGGT GATAGAGGAT GATGTGGAAA TTGGTGCGAA TACTTCGATA
GACCGGGCTA CGATGGGCTC TACGTTTATC AGGAAAGGGG TTAAATTAGA CAACCTGATC
CAGATTGCAC ACAATGTTGA TGTGGGTGAG CACAGTGTTG TTGCGGCACA GACAGGGATT
TCGGGCAGTT CTAAACTGGG CGAAAAGTCT GTTATTGGAG GGCAGGTGGG CATCGCCGGT
CACCTTTCGC TGGCAAAGGG CACCCAGATC GGGGCCCAGG CAGGGATAAA TTTTAATACC
ACTGAAGAAA ACAAACAATG GCACGGAAGT CCGGCACAGC CCCTTCGCGA CTGGATGCGG
GCGTCTGTGA TCTTTAAACA GCTGCCTAGT GTTGAAAAAA GGATAGCGAG CCTGGAAGCA
AAGATTAAAC AGCTGAATGA GCTCATTGAA CAAAACAGTA CAATACCAAA ATAA
 
Protein sequence
MQFTAKQISE FIDGTIEGDE RVGVSELSKI EDGKAGSLCF LSNPKYENYL YSTSASVVIV 
GKDFVPSQQV NSTLIRVADP YSAFSVLLEK YNEVVNQNSA QVGIEQPSFI HPSAKIGKNV
FIGAFSYIAE NVEIGDNCKV SPQVYIGADS ALGRNCTLFP GVKLYNRSVL GNNIIIHSNT
VVGSDGFGFA PQADGTYTKI AQIGNVVIED DVEIGANTSI DRATMGSTFI RKGVKLDNLI
QIAHNVDVGE HSVVAAQTGI SGSSKLGEKS VIGGQVGIAG HLSLAKGTQI GAQAGINFNT
TEENKQWHGS PAQPLRDWMR ASVIFKQLPS VEKRIASLEA KIKQLNELIE QNSTIPK