| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4248 |
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| Symbol | |
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| ID | 8255384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5122958 |
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| End bp | 5126548 |
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| Gene Length | 3591 bp |
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| Protein Length | 1196 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937914 |
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| Product | ATP-binding region ATPase domain protein |
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| Protein accession | YP_003094501 |
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| Protein GI | 255534129 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAA GAACGATTAA AAATAATCTG AGGATCGGTT TGGGGCTATC CCTGCTGATC
CTGTTTATCA CTTCCCTGGC TTCTTATTTA AGTATAAAGA ACCTGATCGG CAGTGCCGAC
CTTGTGCAGC ACAGCAATGA TGTGATGACC AATCTGGATG GGGTGATCTC GGTATTGAAA
GATGCGGAAA CCGGGCAGCG GGGCTACCTG CTTACAGGAG ATAAAGACTT TCTGGAGCCC
TATAACGGAG CCGAACAGCA AGCAATTGCT TTGCTGGATG AGGTAGCTGC TGAAACCAAA
GACAATCCGG TTCAGCAAAG GAACGTAAAA AAATTGCGGG AGGTGATTAC AGGCAGGTTG
CAGATATTAA AAAAAACAGT GGCGATAAAA AGCAGGGGTG GAAATGTAAG TGTTGGTGAG
CTGATCAATG GTAAGACCTA TATGGATTCG GCCCGCGATC TCATCAGGGT AATGCAGGCC
GAAGAGAAAA GATTGCTGGA GCTCAGGACT GCCGATTTGA ACAAGCTGGC AGGTTATACG
CCTTCATTGA TTGTGCTGGC CGCTTTTTTA GCTATTCTGA TTACTTTCTT TTTTTACCGG
AAAGTTTCGG CTGATTTTAA TACCCGGACA AGGTTGCAGC AGGAGCTACA GGATAAAAAT
GATGAAATAG ACAACAGGAT AGAGGTGATA CAAGGCATTG CGGCTCAGAT CTCGAGCGGT
GATTACCGGA TCAGGCTTGA TGAGGAGGAA AAAGATGGGC TGGGCAGTCT GGCCGGATCA
TTAAATGCCA TGGCTGAGTC TTTGCAGTAC TCTTTTTCTT TGCTGGCAGA TAAAGAGTGG
TTACAATCGG GGATCGCTAC CCTGAATGAT AAAATGGTGG GAGAAAAAAG CGTAAAAGAG
CTTACTCACG ATATTCTGGA AAGTATTGCG GGGCTTACCC ATAGTCAGGT AGGGGCATTT
TATCTGCTTG AAGAGGATGA AAGGCTATAT CTTACCGGGG GATATGCACT GATGGAAGAC
CAGAAAAAGA AAAGTCTGAG CCTGGGTGAG GGTTTAATCG GACAGGTTGC ACAATCGGGC
AGGCAAATCT TAATCAACGA TATTGCTGAA GATGGGCTGA CGATCAGCTA TGCGACCGGC
CATACCAAGC CACGCAATGT GGTTGCTGTT CCGGTTTTTA GAGATGGGGT GGTTGTTGGG
GCAATGGAGT TTGGCGCTTT ACAAAGTTAT ACCCCTTTGC AGCTCGACTT TTTAAACAGC
ATTTCAACCA ATATTGGTAT TGCCATCCAT GTTTCCCAGA ACCGTAAGAA GTTGCAGGAG
TTTTTGGAGG AAACACAGGC ACAGGCCGAA GAATTACAGG CGCAGCATAG AGAGCTGGAA
GGCCTGAATG CGGAACTGGA AGCACAAACC CAAAGGATCC AGACTTCGGA AGAAGAATTA
AGGGTACAGC AGGAGGAACT TTTACAAAGC AACCAGGAAC TGGAAGAGCG AACAAGTTTA
CTGGAAGAAA AGAACCAGCT GATACAGGAG CGGAACCTGG ATATACAGCA CAAGGCCGAA
CAGCTGGAAC AGAGTACCAA GTACAAGTCG GAATTCCTGG CCAATATGTC ACACGAGCTC
CGCACGCCAT TAAATTCCAT CCTGTTGCTG TCGAAGCTGA TGTCTGAAAA CAAGGAACTG
GATAAGGAAT ATATTGAATA TGCGGAGGTG ATACAAAGCT CCGGACAGGG ACTTCTGGGC
CTGATTGATG AAATCCTTGA CCTGTCTAAA ATTGAGGCGG GTAAAATGAA GCTGGAATTT
ACTGATGTCA ATATTACAGA GGTGGCAACA GATATGCGTT CGCTGTTTAG TCCGCTTGCA
AAAAATAAAA ACCTGGATCT GGTGATTGAT GTTGAAAGTG ACATTTCAGG GATCAATACG
GACAGGATGA GGCTGGAGCA GATTTTAAAA AACCTGCTTT CCAATGCGAT TAAGTTCACC
TCAACAGGAA AAGTTGCTTT AACAGTGAAG CAGGACGATG CTGGTAAGGC CATTTTATTT
AAAGTGACAG ATACCGGTAT TGGTATTCCG CTGGATAAAC AGGGACTGAT CTTTGAGGCT
TTTCAGCAGG CGGATGGATC AACGCGCCGT AAATTTGGCG GAACTGGTCT GGGCCTGTCC
ATCAGCAGGG AGCTATCCAA GCTTTTGGGG GGCGAGATAG AGCTGACAAG CAAGGAAAAT
GTAGGCAGTG AGTTTACCCT TGCTTTACCG GTAGACCGGA AGACGATTGT GCAGGTTGAG
ACAGGGCAGG ATGTTATAGC CTCGCCCCTT TATATAGACC GAGGAGAACT TGTTGCAGCA
GAGCGGTTTA CTGTAGATCA TATTCCGCAG GAGATTGAGG ATGACCGGAA CGACATTAAG
CCGGATGACA GGGTAATCCT GATTATTGAA GACGACACTA ATTTTGCAAA AACACTGCTG
CGCTTTACGC GTAAGCGGAA TTATAAAGGT ATCGTTGCGG TCCGGGGAGA TGCAGGAATA
GAGCTGGCCA ATCATTACCG GCCATTGGCT ATACTGCTGG ATATACAGCT TCCTGTAAAG
GATGGCTGGC AGGTGATGGA GGAATTGAAA TCTAACCCTT TGACAAGGCC AATACCTGTT
CACATCATGT CTTCCCTGGA AGTAAAAAAA GAGAGTTTGT TGAAGGGGGC TGTCGATTTT
ATCAATAAAC CTGTTGCTCT GGAACAGATG CAGCAGATTT TTCAAAAGCT GGAGCTGGCC
TTGAGTCGCC ATCCTAAAAA GGTGCTGATC GTTGAGGAAA ATAAGCAGCA TGCAGAGGCT
TTGAGTTATT TCCTGAGCAA TTACAACATT CAGACAGAGG TAGCAGACAA TGTAACACAA
AGCATTGGCG CATTAAACAA ACAGGAAGTA GACTGTGTGA TCCTGGATAT GGGTATTCCT
GACAAGAGTG CTTATGAAAC CCTGGATACC ATAAAGAAAA GCAAGGGGCT GGAAAACCTG
CCCATTATTA TTTTTACCGG TAAAAACCTT TCGAAAGGAG AGGAAAGCCG CATTAAGCAG
TATGCAGATT CTATTGTTGT AAAAACAGCA CATTCTTATC AGCGTATCCT GGATGAGGCG
GCCTTGTTTC TTCACCTGGT AGAAGAGAAA GAAGGTGATG GGAAACAGAA AAAAAACCCA
TCTGAGAAGC TGGGCGGTTT ATATGAAGTA CTGCACCATA AAACCGTGTT GATTGCCGAT
GACGATGTGC GCAATATCTT TTCCCTTACC AAAGCGCTGG AACAGCATAA AATGAAAGTA
CTGGCTGCGA CAGATGGTAA AGAGGCACTG CAAACGCTTA AAGACAACCC TTTGGTGGAT
ATTGTGCTGA TGGATATGAT GATGCCTGAA ATGGACGGAT ATGAGACTAC AAAGGAAATC
AGAAAGATTG CAGCATACAA ACAATTGCCT GTTTTGGCTG TTACAGCAAA AGCAATGATG
GGCGACAGGG AGAAATGTAT TGCTGCCGGA GCTTCAGATT ATATTTCCAA ACCGGTTGAC
ATTGATCAGC TGATCTCATT GCTAAGGGTG TGGCTTTACG ATAGGGTGTA A
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| Protein sequence | MSKRTIKNNL RIGLGLSLLI LFITSLASYL SIKNLIGSAD LVQHSNDVMT NLDGVISVLK
DAETGQRGYL LTGDKDFLEP YNGAEQQAIA LLDEVAAETK DNPVQQRNVK KLREVITGRL
QILKKTVAIK SRGGNVSVGE LINGKTYMDS ARDLIRVMQA EEKRLLELRT ADLNKLAGYT
PSLIVLAAFL AILITFFFYR KVSADFNTRT RLQQELQDKN DEIDNRIEVI QGIAAQISSG
DYRIRLDEEE KDGLGSLAGS LNAMAESLQY SFSLLADKEW LQSGIATLND KMVGEKSVKE
LTHDILESIA GLTHSQVGAF YLLEEDERLY LTGGYALMED QKKKSLSLGE GLIGQVAQSG
RQILINDIAE DGLTISYATG HTKPRNVVAV PVFRDGVVVG AMEFGALQSY TPLQLDFLNS
ISTNIGIAIH VSQNRKKLQE FLEETQAQAE ELQAQHRELE GLNAELEAQT QRIQTSEEEL
RVQQEELLQS NQELEERTSL LEEKNQLIQE RNLDIQHKAE QLEQSTKYKS EFLANMSHEL
RTPLNSILLL SKLMSENKEL DKEYIEYAEV IQSSGQGLLG LIDEILDLSK IEAGKMKLEF
TDVNITEVAT DMRSLFSPLA KNKNLDLVID VESDISGINT DRMRLEQILK NLLSNAIKFT
STGKVALTVK QDDAGKAILF KVTDTGIGIP LDKQGLIFEA FQQADGSTRR KFGGTGLGLS
ISRELSKLLG GEIELTSKEN VGSEFTLALP VDRKTIVQVE TGQDVIASPL YIDRGELVAA
ERFTVDHIPQ EIEDDRNDIK PDDRVILIIE DDTNFAKTLL RFTRKRNYKG IVAVRGDAGI
ELANHYRPLA ILLDIQLPVK DGWQVMEELK SNPLTRPIPV HIMSSLEVKK ESLLKGAVDF
INKPVALEQM QQIFQKLELA LSRHPKKVLI VEENKQHAEA LSYFLSNYNI QTEVADNVTQ
SIGALNKQEV DCVILDMGIP DKSAYETLDT IKKSKGLENL PIIIFTGKNL SKGEESRIKQ
YADSIVVKTA HSYQRILDEA ALFLHLVEEK EGDGKQKKNP SEKLGGLYEV LHHKTVLIAD
DDVRNIFSLT KALEQHKMKV LAATDGKEAL QTLKDNPLVD IVLMDMMMPE MDGYETTKEI
RKIAAYKQLP VLAVTAKAMM GDREKCIAAG ASDYISKPVD IDQLISLLRV WLYDRV
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