Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4224 |
Symbol | |
ID | 8255360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 5101381 |
End bp | 5102016 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644937890 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_003094477 |
Protein GI | 255534105 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.59284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACCAC TCCAGGAAAT TTCCTATTTT GCCCTGGCCG CCCTGCTCCT GGTGATCAGC CCCGGTCCTA ACATGATCTA TTTAATCTCC CGTTCCATTA CCCAGGGACA GCGATCCGGG TTAATTTCAC TGGCCGGCAT CATTTCCGGT TTCCTTTTTC ACATCATCAT GGTCTCTGCC GGACTCACAG CAGTACTTTT TGCCGTTCCT TTTGTATACT CCACCATTAA AACCCTGGGG GTGTTGTACC TCCTGTACCT GGCCTACCAG GCCATTAAGC CCAACGGAAA AAGTCTTTTC GAAGTCAGAC AAGACCTGCC AAACGACAAA CCGGCTAAAT TGTTCAAAAT AGGGGTCCTT ACTACCATCC TGAACCCTAA AGTTGCCGTA TTCTATTTGT CATTCTTCCC CTATTTTATC AAACCGGAAT ATGGCTCGGT CTTCATACAA AGCCTTCAAC TGGGCATTAC CCAGGTAAGC ATCAGCTTTA CAGTTAACTT TATCATCGTT TTAACTGCAT CAAAAGTTGC CCTGTTTTTT TCAAAAAGTC CCGGCTGGGT AAAAATCCAG AAATGGTTTA TGGCAAGTAT CCTGGCATCC CTTGCGATAA AAATGGCCTT AAGCAAGGAA AAATAA
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Protein sequence | MIPLQEISYF ALAALLLVIS PGPNMIYLIS RSITQGQRSG LISLAGIISG FLFHIIMVSA GLTAVLFAVP FVYSTIKTLG VLYLLYLAYQ AIKPNGKSLF EVRQDLPNDK PAKLFKIGVL TTILNPKVAV FYLSFFPYFI KPEYGSVFIQ SLQLGITQVS ISFTVNFIIV LTASKVALFF SKSPGWVKIQ KWFMASILAS LAIKMALSKE K
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