| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4179 |
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| Symbol | |
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| ID | 8255314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5054508 |
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| End bp | 5057363 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937844 |
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| Product | ATP-dependent nuclease subunit B |
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| Protein accession | YP_003094432 |
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| Protein GI | 255534060 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0186449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAT TTTTACAGGA GGTAGCAGCA GATCTGGTCG CAAGGTTTGG CGATGGCTTA
CAACATTGTG CAATTATTTT TAACAACAAA AGACCGGCAG CCTATTTACA GAAACACCTG
GCCGACCTGA TAAAAAAGCC TTTTTTTAGT CCCTCTTTTT TTACGGTTCA GGAGTTTTTT
GCTAAATGGA CCAATTACAG GATAGCCGAT TTTTACATAC AGTTTTTTAC GTTGCATAAA
ATTTATAACC AGCTGCTCAA AGAAGAGGGG ATGGAAAGCA TTTCGGGGAA TAAATTTTTT
CCGCTGGCAA AAATTATATT GGCTGATTTT GCACAGATAG ATATAGATCT GGTTGATGCG
GATAAAATTT ACCGGGACCT GGAAGACATA TCTGTCATCA ATAAAGATTT CGATTATTTA
AGCCCTGAAC AATATCAATA TCTGTCGCAG TTCTGGACTT CCTATTCTGA AGGGAAACAC
AAAAGACAGC AGGAACTTTT TATAAAAATG TGGCGCAGAA TGCCTAAACT TTATCATCAG
TTTCATACTG CATTAAAGGA ACAGGGTTTT GTAACCAATG GCGCAGTTTA CAGGGGGCTG
GCCGAAGGTA ATGCCGGAGA ACAAAATTTT ATAAAGGGAT TTGATAAGGG TAAAATCATT
TTTGCTGGCT TTAATGCACT TAGTAACGCA GAGGCTAAGG TTTTTGTGAA CTTACAGAAA
GCCGGCAAAG CGTTGTTCTA TTTTGATGCA GATAGCTATT ACCTGGATGA TCCGTTACAG
GAAGCCGGGC TGTTTTTACG AAAAAATATT TATCAGCTGG GAATTAAAAA CGTTTTTGAA
AATAACCCCA GTTTAATCCG TACCGAAAAA CACTGCGTTG ACGTGTATAG TGTACAGGGG
CAGACTGCAC AAGCGAAGAT TTTGAACAAT ATTTTAAAAG AGGACTATGC AAATGAGGCA
GAAAGCCAGT CTGTTGTTGT GGTTTTGGCC GATGAGAGCC TGCTGATCCC TACTTTGCAA
ACCATACCAA CAAACCATAA TGGCCGGGAG CTGGAACTGA ATGTCACTAT GGGTTTTGCA
TTGGCGGCTT CAGGTGTATA TGGGCTTATA GATCTCTGGT CGGGCTGTCA GCTGGAAATT
CAGCAGACGG GGCGGTTGTC CTATAAGAAT GTTGAGGCTT TCCTGACCCA CCCTTTAACG
GGGCTGAGAC AAGCGATGCG GGATAAGATC AATACCGCGT TGCTGGCAGA AAAGGAAATA
GAAGTGCCTT ATACAAGATT GGTTAATCAG AAAGGACTTT TTGAGGTTTT CTTTAAAAAG
CTGTTGCATG CCGGCGAAGT GATGGAACAG TTGCTCGAAG TGATGAATTT TGTACTCGCA
AGGCTGTCCC ATGCGGGTAA TTTAAAAAAA ATAGATGCTG AATTATTTGC AAAGGCCATT
CAGGAGCTTA ACAGGTTATA CGATACTTTT GGTAAGCATG TTGACCATGA AGAAATCCCA
TTCATTATCT CATTGGTGCA GAAAGCAGTT ATGGGGCTGG CAGTGCCGCT TTCCGGCGAT
CCTTTAAAAG GTATACAGGT AATGGGTTTA CTGGAAACAA GAAATCTGAA TTTTGACAAG
GTAGTGATGC TGGGTTTCAA TGAAGGGATT GTCCCCAAAT CCTCAGTCGG GAATAGTTTT
ATTCCGGATA GCATCCGGCG TGTTTACGGC CTTCCTGTGC TGGAAAATCA GGATGCCATT
TCTGCTTATA TGGTTTACAG GCTTATTCAG CGTGCATCTG ATGTAAGTTT TGTTTACAAT
AGTCTTACTG ATGATGCTAC ATCCGGTGAA CCCAGCAGAA TTTTAAAACA GCTGGCCTAC
GAAAGTGGAT TTGAGTTTAA TTACCATACG CTGGATTTAA ATGTAAGAAC AGAGCCCCTT
AAAGAAATCA CAATTAAAAA AGAGGGCAAT GAAGCCATAC AACAAGGTTT GCAGCGATAC
CTCAACAAGC AAAAGACGCT TTCGCCGTCG GCGCTAACCC AGTATATCCT CAATCCAATC
GATTTCTTTT TCAATTATAT CGCAGGTATT AAGGAACCCA AGGAGATCAG TGCGGTTGTA
GAGGCCAATG AAGTAGGGTC TATTTTGCAC AAGGTGATGG AATATTTTTA CAAAGATTGT
ATCCGTCAGG AAATCACATT GCCTTTGCTA AAGGAAAAGC GTAAAAAAAT TCCGGCACTG
ACACAGAAAG CTTTTGCTGC AGTTATATTT AACAATCCTG AAAAACAAGC AGAATTTAAG
GGGATGCAGA AAGTGATCCT TGCGATTGTT GAGGCTTATG TAAATATTAT CGTAAGCCAG
GATGAGCGCC AGACCCCCTT TATGATTGAA AGCCTTGAGC AGTGGGTGGA GGCAGATATC
AGTTTCCCGC TTGGAGGAAG GGCAGCCAGC ATCAGGATAG GGGGCATTAT AGACAGGGTA
GATCTAAAGG ACGGTATTAC AAGGATCATA GATTATAAAA CCGGGAGCGA CAAGCTGAAT
TATAAAGACA TTCCTGAATT GTTTAATACG GATGGGAAAC ACATCAATAA GGCGCTGATC
CAGACCTTGC TTTATACCTA TATTTACGAG CAGTTTTCTG GTAAAACCGC AGTTGAGCCA
AATTTATATG TGGTTAAAAC CATGAGCCAG GAGGGGGTAT GGTTTAAGTC GGGCAGGCAA
AGCCTGTCTG GTTCTTACCT GGAAGAAGTG AAGCCAGAGT TCTTATCGGC CCTAAAAGAA
AAGCTGACAG AATTATTTGA GGCTCCCTAT TTTAAATCTT CCATTATTGA GGACAATTAT
AAATACTCCA TTTATAAAAC ATTATTTGGT AAGTAG
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| Protein sequence | MKPFLQEVAA DLVARFGDGL QHCAIIFNNK RPAAYLQKHL ADLIKKPFFS PSFFTVQEFF
AKWTNYRIAD FYIQFFTLHK IYNQLLKEEG MESISGNKFF PLAKIILADF AQIDIDLVDA
DKIYRDLEDI SVINKDFDYL SPEQYQYLSQ FWTSYSEGKH KRQQELFIKM WRRMPKLYHQ
FHTALKEQGF VTNGAVYRGL AEGNAGEQNF IKGFDKGKII FAGFNALSNA EAKVFVNLQK
AGKALFYFDA DSYYLDDPLQ EAGLFLRKNI YQLGIKNVFE NNPSLIRTEK HCVDVYSVQG
QTAQAKILNN ILKEDYANEA ESQSVVVVLA DESLLIPTLQ TIPTNHNGRE LELNVTMGFA
LAASGVYGLI DLWSGCQLEI QQTGRLSYKN VEAFLTHPLT GLRQAMRDKI NTALLAEKEI
EVPYTRLVNQ KGLFEVFFKK LLHAGEVMEQ LLEVMNFVLA RLSHAGNLKK IDAELFAKAI
QELNRLYDTF GKHVDHEEIP FIISLVQKAV MGLAVPLSGD PLKGIQVMGL LETRNLNFDK
VVMLGFNEGI VPKSSVGNSF IPDSIRRVYG LPVLENQDAI SAYMVYRLIQ RASDVSFVYN
SLTDDATSGE PSRILKQLAY ESGFEFNYHT LDLNVRTEPL KEITIKKEGN EAIQQGLQRY
LNKQKTLSPS ALTQYILNPI DFFFNYIAGI KEPKEISAVV EANEVGSILH KVMEYFYKDC
IRQEITLPLL KEKRKKIPAL TQKAFAAVIF NNPEKQAEFK GMQKVILAIV EAYVNIIVSQ
DERQTPFMIE SLEQWVEADI SFPLGGRAAS IRIGGIIDRV DLKDGITRII DYKTGSDKLN
YKDIPELFNT DGKHINKALI QTLLYTYIYE QFSGKTAVEP NLYVVKTMSQ EGVWFKSGRQ
SLSGSYLEEV KPEFLSALKE KLTELFEAPY FKSSIIEDNY KYSIYKTLFG K
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