| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4147 |
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| Symbol | |
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| ID | 8255282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5018880 |
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| End bp | 5022572 |
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| Gene Length | 3693 bp |
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| Protein Length | 1230 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644937812 |
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| Product | ATP-binding region ATPase domain protein |
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| Protein accession | YP_003094400 |
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| Protein GI | 255534028 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.175374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATACTGG GCGCTTGTTG TATCGTTACT GCTTTATCTT TAAAGCATTC TATTACTAAA
AAAGAACTGC TTGCTTATGA GGCCCGTCAG CTTCAGGAAA AGCTAGAAGC TAAGGAGCGG
ATTGTCTATG ATTTTTTATC AGATGATAAA CAGGTAGAAA ATGCCAAAAG GTATGACCAG
GATGAAAACC ATGGTTTAAA CTTTATTAAA ACTTACCGCA GCCAGGGTAT TAACATTTTG
GTATATAAAG AGGGGAACCT TAAATTCTGG AGCTCATTCC GGGCCTTTCC CTCAAATTTG
CAGGGCATTA AAGAGGGAAC CTCCGTGGTG ACGTTGCGCA ATGGCGTTTA TGAAATTATA
AAAAAGACCT CAGAAAATTA TTCCATTATT TTTTTGATAG ATATCAAAAG TCAGTTTGAT
ATCCAGAACC AGTACCTGGA AAATATCATT TCCCGGCATC TTTGCCCTTC CAGCTCATTA
ACCCTTGCAA CCTATGCAGA CCGGGAAGTG TATGGTATAA GAAACATCAA GGGTGAACCT
TTGTTCGAAG TTAAACTAAA ACAGGGCTAT TCCAAAAGTA TCTACGCAAC CATTGAAGTA
TGGCTTTGGG TAATAGGAAT TTTCAGCTTT TGTCTGTTTT TCAATTCCCT TTCTGCCTGG
TTGGTCAGAG CGGGGAGGCC AATTGCAGGT ACCTTGTTGC TGATCCTGTT TTTTGTCGCC
ATTAGGGTAA CAGATCTGGA ATATGGGTGG TTTAACCATC AATTTAATTT GCAGATATTT
AGCCCGACTA TATTTGGAGA AAGCTTTTTC CTGCCTTCCC TGGGCGATTT CCTGCTCAAT
GTAATTGCCT TCACCTGGGT TGTAATGTTC ATGTACACCT ATAGTGATAA ATTCAAGGTG
CCGCAATGGT TATTGGACAG CAAAGTAGCC GGCCTGATCT TTCACCTGGT TTTATTAATT
GCTTTTGCAG CATTGGCATT CTTGTTCGAT CAGGTTTTTT TCGGGTTTAT CATCAATTCA
AAAATAAATT TTAACATTAC CAATATTATC AATCTTGGCT GGATCAGCTG GGTTAGTATC
ATCATTTTAT GCCTGGTATG GTTTGATGTT TACCTGCTGG GCAATGTATT TATGCAGCAA
ACGCTACAGC TTAATGTAAC TAACCGCGAA AGACTTATCC TTTTTCTGTC TGCCTTTTTT
GTCTACCTGA TTTATAGGAT GGATACAGGT TTTAGTATAT TTTTCATCGC TTATGCCCTG
CTCATCTTTA TTATGGCATG GAATATCTAT ATCAGGAAAA AGAAATTTTC TATTGGCATA
TTTGCTGCAC TCTTCTTTTG CCTGGCATTT ATAACCTCTA TCAAATATCT CAGGTTTACC
GATGTTAAAG AAAAAAATAA AAGATATACT ATTGCCCAAA AATTGGGCTC GACAGATGAT
CCTAAAGTGA TCAGTTCTAT CGAAAGCCTG GAAAAAGCCG TTTCTACAGA TGTGTTTATT
GCAGAATATT TTAAACAACC TAAGCTGGAG GAGACTTTTG ACCTGCAAAA ACATGTTAAC
AAAATATTGC TGGGTGGCTA CCTTACCCAG TTTGAATATA ATTTATATGA GTTTAACGGC
CAGGATTCTG CAATTTCCAA AGAAAATCCG GTAGCTTTAA GCTATTATAA AAACCTGGTC
CAATCCGGCT CTGTTAAAGT ACCTGAATCA GATTTCTTTT ACAGGATGAA TTATACCTTC
GGTTATCAGA ACTATTTTGG TATCATCCCC ATATTTGTTG ACTACAGGAT ATTGGGTACA
TTGGTGATAG ACCTTAAATC TCCGCAATAT AATTTCAATA GCCAGCTTCC GGAGATACTG
GCCGATGGCA GAATTAAAGG TGAGGATGAT TATAGCAGTT ATTCTTTTGC TTTCTACAAT
TCTGGTAAGC TGGTAAATCA ATCAGGTAAA TACACCTATA AACTTTCGAG TGTTGATTTT
AAAGGTAAGG TAGGAAAGGG CGAAATCGTA ACCGATACCC TGGGATACAC ACATCTGGTG
TATATGCCAG CCAGCTCAAA AATGATCGTG ATCAGTAAAG AGAAAGTTTC TTATGTGGCC
AGGCTGGCTA CGCTGTCGTT TTTCTTTCTT GTTTTCATCA TCTTTTCAAT CACACTTTAC
GCCCTGATCT GGTTGCTGAA AAATATTGAT GAAAGCTGGG GTAGCTGGTT CAATATCAAC
AGGTCACTCA TGATCAATGC CAATAAGATT CTTTATAAAA CAAGGATACA GTTCTCTATC
GTACTTTCGG TTGTGGCTAC CTTGGTGATC GTTGGCTGGA CAACCTATTT TTACATCAGG
GAAGAATATC GTAAACAGCA GGAAAATTTT ATCAAAGAAA AAATCAGAAA GGTACAACTT
TCTTACGAAA AGCAAATTTT TAGTATAGGA GTTATTCCTG AGGTTACGGA CCAGAGCAAT
GCCGATTTTA ATCAGTTTGC CAATATCAAT GCTACATATC TGAACCTTTA TGATACGGCC
GGGAATGTGC GGTTTACCTC GATCCCCAAA ATTTACGACT TTGGTATCAT AGGTAAAAAA
ATGGGGCCCG AGGCTTATAT CTACCTTAAA GCCCAGCAAA AATCTGAGTA CATTAACCCT
ACAGAACATA TTGGCGAGGA CTTTAAATAT GCCTCAGCTT ATGCACCGAT CCGAAATGCC
CAAAATAAAA CGATAGCCTA TATCGGTTTA CCTTATTATG CAAATGAAGC GGATTATCAG
AGTAAAATAG GTCTTTTTAT CAATACGCTG ATCAATATTT ATGCATTGGT GTTTGTAGCC
ATTGGTATCC TTGCTGTTTT TCTTGCCAAC CAGATTACGA GTCCGCTAAC TTTTATACAG
GACAGCATCC GTAAAACCAA ACTTGGGCAA AAAAACCAGC CCATTCAATG GTCCCGTCAT
AATGAGATCG GATCCCTGAT AAAAGAGTAC AATAAGATGA TTGCTGCACT GGAAGAAAGT
GCAGCTAAAC TTGCCCGGTC CGAACGTGAA AGTGCATGGA GAGAAATGGC CAAACAGGTA
GCCCATGAAA TTAAAAACCC CCTGACGCCA TTAAAGCTAG GGGTACAATT GCTTGAGAAA
TCCTGGAAAG AACAGGACCC AAATTTTGAA AAGAAATTTG AGCGGTTTAA CAAATCATTT
ATTGAACAGA TCGACAGCCT GTCTACCATT GCCTCTGAGT TTTCTAATTT TGCCAAAATG
CCCGACACTA AGCTGGAAAA ATTACAACTG TTGCCAATCA TTGAACAAGC CAGGAATGTT
TTTACCAATG CGGAAGATGC GGAAATCTAT ATTTTTAATC ATACACGCAT GGATATAGAG
GTGCTTGGCG ATAAGGACCA ATTGCTGAGA ACATTCAATA ACCTGCTTAA AAATGGAATT
GAGGCCGGCA ATGCAAATGA TAAATGTGTG ATCAAGGTAA GGATCAACCA CAATGATACG
CATGTATTCA TTGAAGTGGA AGACAATGGC AAGGGAATAG ACCCTTACTT ACAGGATAAA
ATATTTGTGC CCAATTTCAC TACCAAATCA TCTGGTACAG GCTTGGGCCT TGCATTTGTA
AAACAGGCGG TAGAAAATGC AGGTGGTACG GTAGATTTTA AATCTGTAAC AGGCATAGGA
ACTACATTTT ATCTTAGTTT TCCCTTATCT TAA
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| Protein sequence | MILGACCIVT ALSLKHSITK KELLAYEARQ LQEKLEAKER IVYDFLSDDK QVENAKRYDQ
DENHGLNFIK TYRSQGINIL VYKEGNLKFW SSFRAFPSNL QGIKEGTSVV TLRNGVYEII
KKTSENYSII FLIDIKSQFD IQNQYLENII SRHLCPSSSL TLATYADREV YGIRNIKGEP
LFEVKLKQGY SKSIYATIEV WLWVIGIFSF CLFFNSLSAW LVRAGRPIAG TLLLILFFVA
IRVTDLEYGW FNHQFNLQIF SPTIFGESFF LPSLGDFLLN VIAFTWVVMF MYTYSDKFKV
PQWLLDSKVA GLIFHLVLLI AFAALAFLFD QVFFGFIINS KINFNITNII NLGWISWVSI
IILCLVWFDV YLLGNVFMQQ TLQLNVTNRE RLILFLSAFF VYLIYRMDTG FSIFFIAYAL
LIFIMAWNIY IRKKKFSIGI FAALFFCLAF ITSIKYLRFT DVKEKNKRYT IAQKLGSTDD
PKVISSIESL EKAVSTDVFI AEYFKQPKLE ETFDLQKHVN KILLGGYLTQ FEYNLYEFNG
QDSAISKENP VALSYYKNLV QSGSVKVPES DFFYRMNYTF GYQNYFGIIP IFVDYRILGT
LVIDLKSPQY NFNSQLPEIL ADGRIKGEDD YSSYSFAFYN SGKLVNQSGK YTYKLSSVDF
KGKVGKGEIV TDTLGYTHLV YMPASSKMIV ISKEKVSYVA RLATLSFFFL VFIIFSITLY
ALIWLLKNID ESWGSWFNIN RSLMINANKI LYKTRIQFSI VLSVVATLVI VGWTTYFYIR
EEYRKQQENF IKEKIRKVQL SYEKQIFSIG VIPEVTDQSN ADFNQFANIN ATYLNLYDTA
GNVRFTSIPK IYDFGIIGKK MGPEAYIYLK AQQKSEYINP TEHIGEDFKY ASAYAPIRNA
QNKTIAYIGL PYYANEADYQ SKIGLFINTL INIYALVFVA IGILAVFLAN QITSPLTFIQ
DSIRKTKLGQ KNQPIQWSRH NEIGSLIKEY NKMIAALEES AAKLARSERE SAWREMAKQV
AHEIKNPLTP LKLGVQLLEK SWKEQDPNFE KKFERFNKSF IEQIDSLSTI ASEFSNFAKM
PDTKLEKLQL LPIIEQARNV FTNAEDAEIY IFNHTRMDIE VLGDKDQLLR TFNNLLKNGI
EAGNANDKCV IKVRINHNDT HVFIEVEDNG KGIDPYLQDK IFVPNFTTKS SGTGLGLAFV
KQAVENAGGT VDFKSVTGIG TTFYLSFPLS
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