Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4070 |
Symbol | |
ID | 8255204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4912547 |
End bp | 4914013 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937734 |
Product | proton-translocating NADH-quinone oxidoreductase, chain M |
Protein accession | YP_003094323 |
Protein GI | 255533951 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000278055 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACAAC TTTTACTACT TCTTCTATTT TTACCATTGG TTGGCGCCTT GGTTACCGCA TTTTCCGGAA ATGCAGCAAA GCATGTTGCA TTGGTTTCGG CAATCGCTTC TCTGGCCCTG GCCCTGGTTA TGGTATGTAA TTTTATACCA GATGCCAGTA CGCAGTTTAT GGTAAATTGT CCATGGATAA AAGACCTGGG TATCAGTTTT CATGCAGGTG TGGATGGGAT CAGCATGATC ACTATCCTGC TGACCAATGT ACTGGTTCCA TTGATCATCC TTTCGGCGTA CCAGCACCAG TATAAAAGTG CAAATGCCTT TTTTGCACTG ATCCTGTTTA TGCAGAGCGG ATTGCTGGTG GTGTTCACGG CCATGGATGC ATTTCTTTTC TATATCGGAT GGGAAGCAGC TTTGATCCCT ATTTACTTTA TATGTGCCAT ATGGGGTGGC AAGGACCGTA TCCGGGTAAA CATGAAATTC TTTGTGTATA CCATTGCAGG TTCTTTGTTT ATGCTGCTGG GTATCATTTA CCTTTATTTA CAGAACCCTG CCAATAATTT TGACATACAG GCATTTTATA GCCTGAATTT AGATTCGACC CAGCAGGCCT GGATATTCTG GGCGTTCTTT GTGGCCTTTG CCATTAAAAT GCCAATATTT CCTTTCCATA CCTGGCAGCC GGATACCTAT ACAGAAGCAC CTGCTGCCGG AACCATGTTA CTTTCGGGTA TCATGCTAAA AATGGGTATT TATGGGGTGA TCAGGTGGTT GTTGCCTGTT GTGCCTGCGG GTGTGCAGGA ATGGGGGCAG CTGGCCATCA TCCTGTCTGT CATTGGTGTG GTATACGCTT CACTGATTGC TTTTACCCAG AAGGATGCCA AACGTCTGGT GGCTTATTCC TCTATCGGAC ACGTAGGCCT GATCTCGGCA GGTATTTTTG CGTTAAATGT GCAGGGAATG CAGGGTGCAA TGATCCAGAT GCTAAGCCAT GGTATTAACG TGATCGGTCT TTTCTTTGTA CTGGATATTA TTGCAAGCCG CGTGCATACC TATAAAATTG CGGAACTTGG CGGGATTGCC AAACAAGCCC CTAAACTGGC TATTGTATTC CTGATCATTG TTTTGGGAAC TGTTGCTTTG CCGGGTACAA ACGGTTTTAT AGGCGAGTTC CTCCTGCTGA TCGGTATTTA TCAGTATAAC CTTTGGGCGG CCGTATTTGC AGGATTGACC ATCATTTTCG GTGCAGTATA TATGTTCAGG ATGTACCAGA ACATCATGCT GGGCAAGACC AATGAACTGA CCATTGGCTT TACCGACATA AAAGGATCGG AGCAGGTTGT ATTGTACATC ATTTGTGCAC TTGTTATTGT TTTGGGCGTA TATCCTAAAC CAATTTTGCA ACTGTCAGAA GCATCAGTAC AACATTTAAT AGAACAGGTA ACTCAAAAAT TAACATCGGT AAACTAA
|
Protein sequence | MEQLLLLLLF LPLVGALVTA FSGNAAKHVA LVSAIASLAL ALVMVCNFIP DASTQFMVNC PWIKDLGISF HAGVDGISMI TILLTNVLVP LIILSAYQHQ YKSANAFFAL ILFMQSGLLV VFTAMDAFLF YIGWEAALIP IYFICAIWGG KDRIRVNMKF FVYTIAGSLF MLLGIIYLYL QNPANNFDIQ AFYSLNLDST QQAWIFWAFF VAFAIKMPIF PFHTWQPDTY TEAPAAGTML LSGIMLKMGI YGVIRWLLPV VPAGVQEWGQ LAIILSVIGV VYASLIAFTQ KDAKRLVAYS SIGHVGLISA GIFALNVQGM QGAMIQMLSH GINVIGLFFV LDIIASRVHT YKIAELGGIA KQAPKLAIVF LIIVLGTVAL PGTNGFIGEF LLLIGIYQYN LWAAVFAGLT IIFGAVYMFR MYQNIMLGKT NELTIGFTDI KGSEQVVLYI ICALVIVLGV YPKPILQLSE ASVQHLIEQV TQKLTSVN
|
| |