Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4026 |
Symbol | |
ID | 8255160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4868160 |
End bp | 4870256 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937690 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_003094279 |
Protein GI | 255533907 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTAA TGACATTTTT GCGGAACCGC GCGGGCTATA TCCTGGTAGG GGCCATCGGT TTTGCAATTG TTGCATTTTT AGTTGGTGAT GCAATTAACG TGGGTAAGCC TTTCTGGGCT GAATCTCAAA AGGTTGTAGG GTCAGTTGAC GGTGAAGAAA TTAGCATAGA TCAGTTTGGT CCGAAAGTAG ACCAGAGTTT AGCGCAATTT AAACAGCAAT ATGGTGGTTC CGGCAATGCA CAGATGCAGG CTATGGCCGT AGATAATGTG TGGCAGGGTG AAATTGCCAG TATTCTTTTA GGTAAGGAAT ATAACCGTTT GGGTTTAACA ATATCCAGTG ATGAGCTGTT TGACCTGCTG CAGGGCAAAA ACCCGAGTCC GCTTATTGTA CAATATTTTG GCAACCCTCA GACGGGAGAA GTAAACCGCG CTGAAGTATT GGCTTCCTTA AAACAACAGG ATAAAAATCC ACAGTTAGAG AAGCAATGGG AGCTTTTACA GAATGAGATT GAAAAGCAGG CACTTCAGAA AAAATATGCC AACCTGATCA GTAATTCTAT TTATGTGACT ACGCTGGAGG CCAATGATGA TTACCAGAAC CGTAATAAAC TGGCGAGCTT CAAGTATACC CTGCTGGATT ATGCAGCTGT GCCGGATGCG ACAGTAAAAC CAACAGAGTC TGATTATTCA GATTACTATA ATGAAAACAA GAAACGTTTT GAAAATCCAT CGGAGACGCG CTCGTTTGAA TATGTGGCTT TCAGTGTAAG CCCTACAAAA GAAGATTCGG CGGCAGTTAA AACCCAGGTT GATAAACTTG CGGCTGATTT TCGGACGGCA GCGAATGATT CCCTGTTTGC AGCAGTTAAC TCTGATGTGA AGGTCCCATA TGCGTATATG TCTAAAGGCA AACTGGATCC TGCTGTTGAT TCAGTAGTGT TCAACCTTCC TGCAGGCAGC TATTATGGTC CAAGATTTTC TGGAAATTCC TATAAACTGA TCAAGGTGAT TGATACGCGT TTTTCTCCGG ATTCGGTAAA AGCAAGCCAT ATTCTACTTG ATCCTTCTAA AATGGGTGGT GCAGATAAAG CTAAAAAACT GGCTGATTCC TTAAAAACAT TGGTGCAGAA CGGAGCTAGT TTTGCTGCAT TAGCTAAACA ATACAGCATT GACGGATCTA AGGATAAAGG TGGCGAGCTG GGCACATTTA GCCGTGGACA GATGGTACCT GTATTTGAAG ATGCGGCATT TAACGGCAAG GCTGGTGACC TTAAAGTGGT AACTTCCCAG TTTGGCGTGC ACCTGATCAA AATCGAGAAA CAGATTGGCT CTTCAAAAGT GGCCAAATTG GCCTATATAG AAAAAGGACT GGCTTCGAGC AATAAAACCA GGGATGCAGC TTATAAAAAA GCAAGTGCTT TCCTGAATGA GGTGAAAAGC AATAATTTTG CTGAACTGGC CCAGAAAAAA GGGTATACAG TTGGTGTTGC AGACCGGGTT ACCCCTACAC AGGGTTTTGC CCCGGGCCTG GACAGTCCGC GTCAGCTGAT CCGTGATGCT TACGCAACTG ATAAAGGTGA AATACTGAAA GAGGTTTACC AGATGGACAA TGCTTATGTA GTGGCCCGTG TAACTGATAT TAAACCAAAA GGCACGCTTT CGCTGGAAGA TGTGAAGAAA GAAATTGAGC CGATGGTACG TACAGCAGTT AAAGCTAAAA TGCTGACTGA AAAAATGAAC AAAGCCTTGC AGGGTTCAGC TAATCTGGCC CAGGTAGCGC AGAAGCTGGG TAAAACAGTA GCACCTGTTG AGAATATCGT ATTTGCAAAC CCTATTATCC CGGGCGCAGC CCAGGAAAAT AAACTGGTAG GTTCGGTTTT TGGATCCCAA CCTGGAAAAC TTTCAAAAGC TATAGATGGT ACAGCGGGTG TATATGCTTT TACGGTAGAT GGTTTTAGCC AGCCAGCTCC TTTAGCGAAC ACTTACAAGC AAAAAGAAGC CATGATGCAG GCAGGTGGAC AGCGCGCTTT AGGTGCGGCT TTCCAGGCCT TACAGGATAA AAGTAAGATA AAAGACAATA GGGTGAAATT CTATTAA
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Protein sequence | MGLMTFLRNR AGYILVGAIG FAIVAFLVGD AINVGKPFWA ESQKVVGSVD GEEISIDQFG PKVDQSLAQF KQQYGGSGNA QMQAMAVDNV WQGEIASILL GKEYNRLGLT ISSDELFDLL QGKNPSPLIV QYFGNPQTGE VNRAEVLASL KQQDKNPQLE KQWELLQNEI EKQALQKKYA NLISNSIYVT TLEANDDYQN RNKLASFKYT LLDYAAVPDA TVKPTESDYS DYYNENKKRF ENPSETRSFE YVAFSVSPTK EDSAAVKTQV DKLAADFRTA ANDSLFAAVN SDVKVPYAYM SKGKLDPAVD SVVFNLPAGS YYGPRFSGNS YKLIKVIDTR FSPDSVKASH ILLDPSKMGG ADKAKKLADS LKTLVQNGAS FAALAKQYSI DGSKDKGGEL GTFSRGQMVP VFEDAAFNGK AGDLKVVTSQ FGVHLIKIEK QIGSSKVAKL AYIEKGLASS NKTRDAAYKK ASAFLNEVKS NNFAELAQKK GYTVGVADRV TPTQGFAPGL DSPRQLIRDA YATDKGEILK EVYQMDNAYV VARVTDIKPK GTLSLEDVKK EIEPMVRTAV KAKMLTEKMN KALQGSANLA QVAQKLGKTV APVENIVFAN PIIPGAAQEN KLVGSVFGSQ PGKLSKAIDG TAGVYAFTVD GFSQPAPLAN TYKQKEAMMQ AGGQRALGAA FQALQDKSKI KDNRVKFY
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