| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4013 |
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| Symbol | |
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| ID | 8255147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4856049 |
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| End bp | 4856630 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937677 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003094266 |
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| Protein GI | 255533894 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGTTGT CTACCATAGG GGAAATAGAA TTATTAGAGA AACTTAAGCA ACAGGACAGG
GCAGCATTTT CGCAGCTGTA TAACTTGTAT GTTAAGAAGA TCTATGCTTA TGCCCTTGGC
ATTCTTAAAT CGCCTGTACT TGCTGAGGAT GTTACACAGG ATACTTTTGT AAAGTTATGG
GAGCATGCGG CATCAGTGAG GACCGACCGT TCGGTTCAGG GTTTTCTTTT TACCATTGCA
AGAAACCTGG CGTTAAATAT TCTTAAACAG GCTTCAAGGG AGACATGGAT CTCGGATGAA
CTGTTTGGAC ACGCACTGGA CCAGAGTGAA GATGGTTTGC AATATACTGA AAGAAGGCAA
ACAGGTGAAT TTATTGGAAA AGCAATTGCG CAGCTTCCTC CACAGCGGCG CCTTATTTAC
GATCTTTGCC GTAATTATGG TTATTCTTAT AAACAGGCGG CAGAGAAACT GGGCATAAAA
GACAGTACCG TAAACAGCCA GATGGTAAAA GCATTGAAAA CGATTAAAGA TTTTATGGTC
CGTAATGGCG CTTTATTGTT GCTTTTGTTT TACCGAAGCT AA
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| Protein sequence | MRLSTIGEIE LLEKLKQQDR AAFSQLYNLY VKKIYAYALG ILKSPVLAED VTQDTFVKLW
EHAASVRTDR SVQGFLFTIA RNLALNILKQ ASRETWISDE LFGHALDQSE DGLQYTERRQ
TGEFIGKAIA QLPPQRRLIY DLCRNYGYSY KQAAEKLGIK DSTVNSQMVK ALKTIKDFMV
RNGALLLLLF YRS
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