Gene Phep_4012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4012 
Symbol 
ID8255146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4854960 
End bp4855961 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content44% 
IMG OID644937676 
ProductFecR protein 
Protein accessionYP_003094265 
Protein GI255533893 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAATC CCATCAAACA ATTATTTGTA AACTTCATTT TAAACCGCTG TAGTCCGGCT 
GAGATCAAAC AGGTCGAAGA ATTGGTTAAA AACGGTGGCC ATGAACTGGA ATGGCGTACA
GCACTGGAAG AAACTGAACA GGAATTTGCA AATTCCGAGC ATGCAGATTT GGTGATTAAT
GAAAGGGAGC TTTTTAAAAG GATCAACTAT TCGATTGGCA CAAGCGTACC GTCCCGGCAA
AAACTATGGG GATGGCTGAC TGCTGCTGCA TCAATTATAT TGATTGCAGG CGTTGGCTTA
TGGTTAATGC GTTCGGAGAT GCGTGTACCG CATGCCATGG AAGCTAAAAG TTCATCGGTA
CAAGCCCGGA AAGACACGAC ACACAAATGG ATCAAATTAC CTGATGGCAG TTCGGTACAG
TTGAACTATG ACAGTTATCT GGAGTATGCC GATTCATTTG AAGGCAAAGC ATTGCGTGAG
GTACGTTTGA TCGGGGAAGC TTATTTTGAC ATTAAACATG ATGCGAAACA TCCCTTTGTG
ATCCATACCG GTAAAATTAA AACTACAGTA TTGGGTACTG CTTTTAACAT TAGTGCCTAT
CAGGCCAGTA AGGCTGTTAC CGTAACGGTG ACCCGCGGAA AGGTAAAAGT GGAGGATGAA
GATAGGACAC TGGCCATACT GACGCCCGAC CAGCAGCTGG CCTGGAGTGC AAGGTTGCCA
GAACCTGTAA AAGCAAAAGT GAACGCTGAG GTGGTGCTGG AATGGAAGAA ACAGGACCTG
ATCATGGACG ACATTACGTT GATGGAAGCT GCGCAGATGA TCACAGAACG ATATGGGGTG
AAGGTTCGCT TTAATAATGA AAAGGTAAAA ACCTGCAGGT TTACTGCTGC TTTTTTAAAC
AGGAACGATA TTAACCAGGT ACTGAATGTA GTGGCGGACA TTACCGGGGC TAGACTTACA
TTAGAAAATA ATATAGTGAC GATTGAGGGG CCAGGATGTT AA
 
Protein sequence
MENPIKQLFV NFILNRCSPA EIKQVEELVK NGGHELEWRT ALEETEQEFA NSEHADLVIN 
ERELFKRINY SIGTSVPSRQ KLWGWLTAAA SIILIAGVGL WLMRSEMRVP HAMEAKSSSV
QARKDTTHKW IKLPDGSSVQ LNYDSYLEYA DSFEGKALRE VRLIGEAYFD IKHDAKHPFV
IHTGKIKTTV LGTAFNISAY QASKAVTVTV TRGKVKVEDE DRTLAILTPD QQLAWSARLP
EPVKAKVNAE VVLEWKKQDL IMDDITLMEA AQMITERYGV KVRFNNEKVK TCRFTAAFLN
RNDINQVLNV VADITGARLT LENNIVTIEG PGC