Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4009 |
Symbol | |
ID | 8255143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4848111 |
End bp | 4850021 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644937673 |
Product | Redoxin domain protein |
Protein accession | YP_003094262 |
Protein GI | 255533890 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.598188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAC ATGCGTTAGC GTGCTGCCTG CTTGTACTTG CTTTATTGCA GGTACAGGCC CAGGTGGTAC AAATTACTCC TGAAAAACCT CAGAGAGGTG AAAAGGTAAC CATTACTTAT CATCCGGGCG CTGCCGGTGC AGCCATTGGA AAAGATGCTA CTGAGGTGAT CATTAACTTC ACGTATTCTA CCTTTTATGA ACTACCCTGG AAGCTGCCTA TGACCAGACA GGGGAACGAC TGGGTAGTTT CATTTGTGCT ACAGCGCTAT GCCACTTTTG CTACCTTTTA TCTGCAGAGC GGAGAGCTTA TAGATAAGCC TGCGGCTGAC CGGCATTATT CGGTTGCTGT GTATAAAGAT GATAAAAGGG TAAGGGATGG CTTTTTACAT GAATCGTATA GCCTTGGGGC ACAAATGCCC AAATCCCCTG GGATCCATGC GCTGCAACTG GAATTGCTGA GAAAGGAGCT GGCCAATTAT CCGGATAATT ATGAAGCAAA GGTGCGCGAG CAAAGTGTGC TAATGGCTAT GGCGAAGACG CCTGCCGAGA AGCTGGAACA CCGGATTGAG GCCAGGAAGA TCATTGCGGC CCAGTTTGAA AAGAACCCAA CCTTTGGCGG GAACCTGAAC AAGGTAACGA TGGGTTACCT GATCATTGGT GAAAATTCGA GGCTTGATTC TATCCGTAAG GTTGTTTCTA AGCGTTTTCC CAAATCAGAT CTGGCTAAAG ATTACCTGAT AACCGCCATT GGTAAAGAAA AGGATACTGT AAAAAAGATT GCACAGCTGG AAGCCCTGTT GAAAACGGGA AATGAAAGCG GTGAAAACTC AACAGACATC CATCGCATGC TGTTTGAACA TTATACCGCT GCGGGAGATG CCGCAAAAGC TGTCTACCAT GCGCGCCGGA GTCTGGGGGC TGCAAATCCC TATACCCCGT TGACCCTGAA AACTATAGCA GGAGAATTAA CAAAAGCGAA ACTCGCGCCT GATACAGCGA TAACTTATGC AGAAGCTGCT TTGAAAATTG CCGATCGGTG GCCGATCGGT GTGATCAGGT ACTTCCCCGA ATATGGTCAT ATTTTGCCTT TTGTAGCCGA TAGTACGCGT AGCAGAACAG TTGCTGAAGC AAGATCAGGC TTGTATTCTA TCATTGCCCT GAATAAATCA TATCTGGGAA ACCGGGCTGA AGCCTTAAAT TATGCGGCTA AAGCGGAAGC TGCAGGTGCT AACAAAGAGA GCTTAATGAA TGTTGCGCTC GTTTATGAAC AGGCTGCTGA TCCAAAAAAG GCCTTTGATG TGTTGTGGCA TGTTTTGTTA AAAGATCCCT CAGACACGGT AGCTATCGCA GCTGCGAAAA AGAATTTTTT GAAGTTTAAT ACTTCGGAAA CTGAATTTAA TGCGAAAGTT AAAAACCTGG AAGCCTTAAA AATGACCCGG TTAAAAGCAG CTTTAAAAAA GCAGCTGATG AACAAACCCG GGCCTGAGCT TTCTGGTCTG ACAGACCTTA AAGGGAATGC GGTAACCAAA GCAATGATGC AGGGTAAGAT AGTGGTCCTG GATTTCTGGG CTACCTGGTG TGTGCCCTGT ATGCAGGAAA TGCCTTATCT GCAAAAAGTT TATGAGCAGT ATAAGCACCA TCCTAATGTG ATGTTTATGG TGATAAACAG CGGTGCGCGA AACACCATTA AAGATGCGCT TGGCTGGGAG GCGAAAAATC CGCAGTATAC TTTTCCACTA TATTTTAACA ATGATCCTGA TATAGGTGAG AAGGTTGGTT TTACATTGAT CCCTACTATT GCGGTTATTG ACCAGCAGGG AAAGATGCAG TTCAGGACCA TTGGTTTTGA AGGTGCAGAG CTGGAACATA AGCTGACAGC GCAGATTGAG GTTTTGCTGG AAGGGAAATA A
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Protein sequence | MFKHALACCL LVLALLQVQA QVVQITPEKP QRGEKVTITY HPGAAGAAIG KDATEVIINF TYSTFYELPW KLPMTRQGND WVVSFVLQRY ATFATFYLQS GELIDKPAAD RHYSVAVYKD DKRVRDGFLH ESYSLGAQMP KSPGIHALQL ELLRKELANY PDNYEAKVRE QSVLMAMAKT PAEKLEHRIE ARKIIAAQFE KNPTFGGNLN KVTMGYLIIG ENSRLDSIRK VVSKRFPKSD LAKDYLITAI GKEKDTVKKI AQLEALLKTG NESGENSTDI HRMLFEHYTA AGDAAKAVYH ARRSLGAANP YTPLTLKTIA GELTKAKLAP DTAITYAEAA LKIADRWPIG VIRYFPEYGH ILPFVADSTR SRTVAEARSG LYSIIALNKS YLGNRAEALN YAAKAEAAGA NKESLMNVAL VYEQAADPKK AFDVLWHVLL KDPSDTVAIA AAKKNFLKFN TSETEFNAKV KNLEALKMTR LKAALKKQLM NKPGPELSGL TDLKGNAVTK AMMQGKIVVL DFWATWCVPC MQEMPYLQKV YEQYKHHPNV MFMVINSGAR NTIKDALGWE AKNPQYTFPL YFNNDPDIGE KVGFTLIPTI AVIDQQGKMQ FRTIGFEGAE LEHKLTAQIE VLLEGK
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